Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC4O75487 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.78■■□□□ 1.08
GPC4O75487 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GPC4O75487 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
GPC4O75487 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.77■■□□□ 1.08
GPC4O75487 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
GPC4O75487 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC4O75487 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC4O75487 AC008406.3-201ENST00000620001 1374 ntBASIC21.77■■□□□ 1.08
GPC4O75487 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
GPC4O75487 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
GPC4O75487 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.77■■□□□ 1.08
GPC4O75487 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GPC4O75487 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.77■■□□□ 1.08
GPC4O75487 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.77■■□□□ 1.08
GPC4O75487 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.77■■□□□ 1.08
GPC4O75487 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC4O75487 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
GPC4O75487 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
GPC4O75487 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
GPC4O75487 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
GPC4O75487 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 ESRRAP2-201ENST00000418437 1549 ntBASIC21.76■■□□□ 1.07
GPC4O75487 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
GPC4O75487 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.76■■□□□ 1.07
GPC4O75487 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
GPC4O75487 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.76■■□□□ 1.07
GPC4O75487 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
GPC4O75487 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.76■■□□□ 1.07
GPC4O75487 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.76■■□□□ 1.07
GPC4O75487 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
GPC4O75487 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
GPC4O75487 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC4O75487 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.75■■□□□ 1.07
GPC4O75487 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC4O75487 DUX4L19-201ENST00000557448 1267 ntBASIC21.75■■□□□ 1.07
GPC4O75487 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.75■■□□□ 1.07
GPC4O75487 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC4O75487 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC4O75487 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.75■■□□□ 1.07
GPC4O75487 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.75■■□□□ 1.07
GPC4O75487 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
GPC4O75487 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GPC4O75487 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.75■■□□□ 1.07
GPC4O75487 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC4O75487 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
GPC4O75487 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GPC4O75487 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC4O75487 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GPC4O75487 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC4O75487 MIR3181-201ENST00000578512 73 ntBASIC21.74■■□□□ 1.07
GPC4O75487 pRNA.6-201ENST00000610482 90 ntBASIC21.74■■□□□ 1.07
GPC4O75487 pRNA.5-201ENST00000612139 90 ntBASIC21.74■■□□□ 1.07
GPC4O75487 pRNA.11-201ENST00000618423 90 ntBASIC21.74■■□□□ 1.07
GPC4O75487 pRNA.13-201ENST00000619112 90 ntBASIC21.74■■□□□ 1.07
GPC4O75487 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
GPC4O75487 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.74■■□□□ 1.07
GPC4O75487 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
GPC4O75487 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GPC4O75487 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC4O75487 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC4O75487 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC4O75487 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC4O75487 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
GPC4O75487 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
GPC4O75487 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC4O75487 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC4O75487 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC4O75487 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC4O75487 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC4O75487 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
GPC4O75487 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC4O75487 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC4O75487 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
GPC4O75487 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GPC4O75487 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
GPC4O75487 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GPC4O75487 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GPC4O75487 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.72■■□□□ 1.07
GPC4O75487 SYT6-210ENST00000641643 1587 ntBASIC21.72■■□□□ 1.07
GPC4O75487 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.72■■□□□ 1.07
GPC4O75487 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
GPC4O75487 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GPC4O75487 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GPC4O75487 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GPC4O75487 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
GPC4O75487 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.71■■□□□ 1.07
GPC4O75487 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.71■■□□□ 1.07
GPC4O75487 AC242852.2-201ENST00000615738 1807 ntBASIC21.71■■□□□ 1.07
GPC4O75487 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.71■■□□□ 1.07
GPC4O75487 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms