Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.7■■□□□ 1.7
CTNND1O60716 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.7■■□□□ 1.7
CTNND1O60716 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.7■■□□□ 1.7
CTNND1O60716 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.7■■□□□ 1.7
CTNND1O60716 ABCB10P4-201ENST00000566803 2184 ntBASIC25.7■■□□□ 1.7
CTNND1O60716 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CTNND1O60716 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.69■■□□□ 1.7
CTNND1O60716 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CTNND1O60716 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CTNND1O60716 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CTNND1O60716 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.69■■□□□ 1.7
CTNND1O60716 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.69■■□□□ 1.7
CTNND1O60716 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CTNND1O60716 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CTNND1O60716 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CTNND1O60716 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CTNND1O60716 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CTNND1O60716 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CTNND1O60716 AC079140.4-201ENST00000507448 529 ntBASIC25.68■■□□□ 1.7
CTNND1O60716 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.68■■□□□ 1.7
CTNND1O60716 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CTNND1O60716 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.68■■□□□ 1.7
CTNND1O60716 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CTNND1O60716 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.67■■□□□ 1.7
CTNND1O60716 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTNND1O60716 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTNND1O60716 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.67■■□□□ 1.7
CTNND1O60716 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.67■■□□□ 1.7
CTNND1O60716 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CTNND1O60716 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTNND1O60716 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTNND1O60716 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CTNND1O60716 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTNND1O60716 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTNND1O60716 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.66■■□□□ 1.7
CTNND1O60716 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.66■■□□□ 1.7
CTNND1O60716 KRT18P11-201ENST00000435214 1283 ntBASIC25.66■■□□□ 1.7
CTNND1O60716 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.66■■□□□ 1.7
CTNND1O60716 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.66■■□□□ 1.7
CTNND1O60716 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.66■■□□□ 1.7
CTNND1O60716 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTNND1O60716 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTNND1O60716 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTNND1O60716 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTNND1O60716 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTNND1O60716 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.66■■□□□ 1.7
CTNND1O60716 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CTNND1O60716 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTNND1O60716 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.66■■□□□ 1.7
CTNND1O60716 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CTNND1O60716 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CTNND1O60716 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CTNND1O60716 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.65■■□□□ 1.7
CTNND1O60716 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CTNND1O60716 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.65■■□□□ 1.7
CTNND1O60716 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CTNND1O60716 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CTNND1O60716 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CTNND1O60716 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CTNND1O60716 ESRRAP2-201ENST00000418437 1549 ntBASIC25.64■■□□□ 1.7
CTNND1O60716 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CTNND1O60716 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CTNND1O60716 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CTNND1O60716 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.64■■□□□ 1.7
CTNND1O60716 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.64■■□□□ 1.7
CTNND1O60716 DUSP8P3-201ENST00000399571 1760 ntBASIC25.64■■□□□ 1.69
CTNND1O60716 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CTNND1O60716 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.63■■□□□ 1.69
CTNND1O60716 CROCCP5-201ENST00000436658 830 ntBASIC25.63■■□□□ 1.69
CTNND1O60716 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.63■■□□□ 1.69
CTNND1O60716 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CTNND1O60716 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.63■■□□□ 1.69
CTNND1O60716 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CTNND1O60716 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CTNND1O60716 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CTNND1O60716 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CTNND1O60716 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CTNND1O60716 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
CTNND1O60716 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CTNND1O60716 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CTNND1O60716 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CTNND1O60716 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.62■■□□□ 1.69
CTNND1O60716 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.62■■□□□ 1.69
CTNND1O60716 AC011767.1-201ENST00000617410 1153 ntBASIC25.62■■□□□ 1.69
CTNND1O60716 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.62■■□□□ 1.69
CTNND1O60716 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.62■■□□□ 1.69
CTNND1O60716 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CTNND1O60716 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CTNND1O60716 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CTNND1O60716 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
CTNND1O60716 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CTNND1O60716 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CTNND1O60716 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.61■■□□□ 1.69
CTNND1O60716 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.61■■□□□ 1.69
CTNND1O60716 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CTNND1O60716 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CTNND1O60716 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CTNND1O60716 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CTNND1O60716 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CTNND1O60716 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms