Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GMDSO60547 PKD1P6-201ENST00000343738 4769 ntBASIC19.21■□□□□ 0.67
GMDSO60547 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GMDSO60547 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GMDSO60547 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.21■□□□□ 0.67
GMDSO60547 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GMDSO60547 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GMDSO60547 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GMDSO60547 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GMDSO60547 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GMDSO60547 AC144652.1-201ENST00000609974 1624 ntBASIC19.2■□□□□ 0.66
GMDSO60547 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GMDSO60547 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GMDSO60547 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
GMDSO60547 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GMDSO60547 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GMDSO60547 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GMDSO60547 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GMDSO60547 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
GMDSO60547 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GMDSO60547 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.19■□□□□ 0.66
GMDSO60547 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
GMDSO60547 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GMDSO60547 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.19■□□□□ 0.66
GMDSO60547 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.19■□□□□ 0.66
GMDSO60547 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GMDSO60547 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GMDSO60547 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GMDSO60547 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GMDSO60547 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.18■□□□□ 0.66
GMDSO60547 AL356441.2-201ENST00000443009 864 ntBASIC19.18■□□□□ 0.66
GMDSO60547 AL356740.2-201ENST00000601559 647 ntBASIC19.18■□□□□ 0.66
GMDSO60547 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GMDSO60547 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GMDSO60547 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GMDSO60547 C11orf96-202ENST00000528572 1834 ntBASIC19.18■□□□□ 0.66
GMDSO60547 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GMDSO60547 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.17■□□□□ 0.66
GMDSO60547 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.17■□□□□ 0.66
GMDSO60547 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.17■□□□□ 0.66
GMDSO60547 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.17■□□□□ 0.66
GMDSO60547 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.17■□□□□ 0.66
GMDSO60547 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GMDSO60547 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GMDSO60547 FBXW4P1-201ENST00000426721 2239 ntBASIC19.17■□□□□ 0.66
GMDSO60547 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GMDSO60547 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 AC139530.1-201ENST00000575312 1977 ntBASIC19.16■□□□□ 0.66
GMDSO60547 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GMDSO60547 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.16■□□□□ 0.66
GMDSO60547 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GMDSO60547 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.16■□□□□ 0.66
GMDSO60547 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.16■□□□□ 0.66
GMDSO60547 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GMDSO60547 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.15■□□□□ 0.66
GMDSO60547 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
GMDSO60547 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GMDSO60547 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.15■□□□□ 0.66
GMDSO60547 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GMDSO60547 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.15■□□□□ 0.66
GMDSO60547 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.15■□□□□ 0.66
GMDSO60547 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GMDSO60547 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GMDSO60547 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GMDSO60547 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.15■□□□□ 0.66
GMDSO60547 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
GMDSO60547 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GMDSO60547 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
GMDSO60547 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GMDSO60547 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
GMDSO60547 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
GMDSO60547 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms