Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFS4O43181 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.92■□□□□ 0.94
NDUFS4O43181 AL031432.3-201ENST00000607698 485 ntBASIC20.92■□□□□ 0.94
NDUFS4O43181 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NDUFS4O43181 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NDUFS4O43181 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFS4O43181 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.92■□□□□ 0.94
NDUFS4O43181 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NDUFS4O43181 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
NDUFS4O43181 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFS4O43181 GUSBP5-202ENST00000510805 1989 ntBASIC20.92■□□□□ 0.94
NDUFS4O43181 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFS4O43181 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NDUFS4O43181 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.91■□□□□ 0.94
NDUFS4O43181 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NDUFS4O43181 AL031602.1-201ENST00000633169 911 ntBASIC20.91■□□□□ 0.94
NDUFS4O43181 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NDUFS4O43181 AL117328.2-201ENST00000624617 1940 ntBASIC20.9■□□□□ 0.94
NDUFS4O43181 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NDUFS4O43181 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NDUFS4O43181 MIR939-201ENST00000401314 82 ntBASIC20.9■□□□□ 0.94
NDUFS4O43181 AC099791.1-201ENST00000416440 715 ntBASIC20.9■□□□□ 0.94
NDUFS4O43181 AC126544.1-201ENST00000580842 1059 ntBASIC20.9■□□□□ 0.94
NDUFS4O43181 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.9■□□□□ 0.94
NDUFS4O43181 AC005837.3-201ENST00000612163 286 ntBASIC20.9■□□□□ 0.94
NDUFS4O43181 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.9■□□□□ 0.94
NDUFS4O43181 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFS4O43181 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NDUFS4O43181 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFS4O43181 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.89■□□□□ 0.93
NDUFS4O43181 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.89■□□□□ 0.93
NDUFS4O43181 AC142381.2-201ENST00000566120 298 ntBASIC20.89■□□□□ 0.93
NDUFS4O43181 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.89■□□□□ 0.93
NDUFS4O43181 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFS4O43181 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFS4O43181 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFS4O43181 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFS4O43181 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFS4O43181 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS4O43181 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS4O43181 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS4O43181 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NDUFS4O43181 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS4O43181 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS4O43181 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NDUFS4O43181 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS4O43181 AC091305.1-201ENST00000479476 895 ntBASIC20.88■□□□□ 0.93
NDUFS4O43181 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.88■□□□□ 0.93
NDUFS4O43181 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.88■□□□□ 0.93
NDUFS4O43181 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.88■□□□□ 0.93
NDUFS4O43181 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS4O43181 AC068587.7-201ENST00000641602 218 ntBASIC20.88■□□□□ 0.93
NDUFS4O43181 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS4O43181 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NDUFS4O43181 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.88■□□□□ 0.93
NDUFS4O43181 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NDUFS4O43181 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
NDUFS4O43181 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NDUFS4O43181 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
NDUFS4O43181 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NDUFS4O43181 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.87■□□□□ 0.93
NDUFS4O43181 SUDS3P1-201ENST00000505831 966 ntBASIC20.87■□□□□ 0.93
NDUFS4O43181 AC087239.1-201ENST00000622671 572 ntBASIC20.87■□□□□ 0.93
NDUFS4O43181 AL136967.2-201ENST00000623968 743 ntBASIC20.87■□□□□ 0.93
NDUFS4O43181 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NDUFS4O43181 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS4O43181 RASA4CP-201ENST00000424092 1398 ntBASIC20.86■□□□□ 0.93
NDUFS4O43181 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS4O43181 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.86■□□□□ 0.93
NDUFS4O43181 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NDUFS4O43181 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS4O43181 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.86■□□□□ 0.93
NDUFS4O43181 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NDUFS4O43181 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS4O43181 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS4O43181 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS4O43181 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms