Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-8O15522 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.32■□□□□ 0.84
NKX2-8O15522 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-8O15522 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.32■□□□□ 0.84
NKX2-8O15522 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-8O15522 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NKX2-8O15522 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-8O15522 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-8O15522 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-8O15522 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.31■□□□□ 0.84
NKX2-8O15522 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NKX2-8O15522 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
NKX2-8O15522 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-8O15522 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.31■□□□□ 0.84
NKX2-8O15522 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-8O15522 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.3■□□□□ 0.84
NKX2-8O15522 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NKX2-8O15522 AC004812.2-201ENST00000611079 2094 ntBASIC20.3■□□□□ 0.84
NKX2-8O15522 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.3■□□□□ 0.84
NKX2-8O15522 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-8O15522 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.3■□□□□ 0.84
NKX2-8O15522 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.3■□□□□ 0.84
NKX2-8O15522 MFSD11-216ENST00000590393 1141 ntBASIC20.3■□□□□ 0.84
NKX2-8O15522 TMEM191A-211ENST00000637163 1067 ntBASIC20.3■□□□□ 0.84
NKX2-8O15522 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.3■□□□□ 0.84
NKX2-8O15522 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-8O15522 LINC01124-201ENST00000409786 2117 ntBASIC20.3■□□□□ 0.84
NKX2-8O15522 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.3■□□□□ 0.84
NKX2-8O15522 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-8O15522 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NKX2-8O15522 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-8O15522 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-8O15522 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-8O15522 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NKX2-8O15522 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-8O15522 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-8O15522 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX2-8O15522 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NKX2-8O15522 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.29■□□□□ 0.84
NKX2-8O15522 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.29■□□□□ 0.84
NKX2-8O15522 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX2-8O15522 AC104187.1-201ENST00000607510 612 ntBASIC20.29■□□□□ 0.84
NKX2-8O15522 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-8O15522 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-8O15522 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
NKX2-8O15522 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.28■□□□□ 0.84
NKX2-8O15522 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-8O15522 LINC00543-201ENST00000567234 1845 ntBASIC20.28■□□□□ 0.84
NKX2-8O15522 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.28■□□□□ 0.84
NKX2-8O15522 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NKX2-8O15522 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NKX2-8O15522 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.28■□□□□ 0.84
NKX2-8O15522 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.28■□□□□ 0.84
NKX2-8O15522 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.28■□□□□ 0.84
NKX2-8O15522 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.27■□□□□ 0.84
NKX2-8O15522 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-8O15522 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-8O15522 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.27■□□□□ 0.84
NKX2-8O15522 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-8O15522 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-8O15522 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.27■□□□□ 0.84
NKX2-8O15522 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.27■□□□□ 0.84
NKX2-8O15522 AC083906.2-201ENST00000511578 360 ntBASIC20.27■□□□□ 0.84
NKX2-8O15522 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
NKX2-8O15522 CD99P1-205ENST00000527459 561 ntBASIC20.27■□□□□ 0.84
NKX2-8O15522 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.27■□□□□ 0.84
NKX2-8O15522 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.27■□□□□ 0.84
NKX2-8O15522 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-8O15522 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NKX2-8O15522 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NKX2-8O15522 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
NKX2-8O15522 AC020928.2-201ENST00000588717 2197 ntBASIC20.27■□□□□ 0.83
NKX2-8O15522 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-8O15522 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-8O15522 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-8O15522 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-8O15522 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-8O15522 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.26■□□□□ 0.83
NKX2-8O15522 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-8O15522 AL050303.2-201ENST00000619798 666 ntBASIC20.26■□□□□ 0.83
NKX2-8O15522 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-8O15522 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NKX2-8O15522 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-8O15522 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.26■□□□□ 0.83
NKX2-8O15522 AC005224.4-201ENST00000583262 1652 ntBASIC20.26■□□□□ 0.83
NKX2-8O15522 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-8O15522 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.25■□□□□ 0.83
NKX2-8O15522 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-8O15522 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
NKX2-8O15522 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-8O15522 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NKX2-8O15522 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.25■□□□□ 0.83
NKX2-8O15522 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NKX2-8O15522 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-8O15522 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-8O15522 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-8O15522 AL121832.2-201ENST00000610979 668 ntBASIC20.25■□□□□ 0.83
NKX2-8O15522 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.25■□□□□ 0.83
NKX2-8O15522 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NKX2-8O15522 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms