Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.16■■□□□ 1.78
FOXN1O15353 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
FOXN1O15353 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
FOXN1O15353 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
FOXN1O15353 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
FOXN1O15353 KRT18P11-201ENST00000435214 1283 ntBASIC26.16■■□□□ 1.78
FOXN1O15353 AC098590.1-201ENST00000468126 897 ntBASIC26.16■■□□□ 1.78
FOXN1O15353 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.16■■□□□ 1.78
FOXN1O15353 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.16■■□□□ 1.78
FOXN1O15353 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.16■■□□□ 1.78
FOXN1O15353 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
FOXN1O15353 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
FOXN1O15353 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
FOXN1O15353 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
FOXN1O15353 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.15■■□□□ 1.78
FOXN1O15353 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
FOXN1O15353 SLC29A4P1-201ENST00000398760 971 ntBASIC26.15■■□□□ 1.78
FOXN1O15353 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
FOXN1O15353 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.15■■□□□ 1.78
FOXN1O15353 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
FOXN1O15353 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
FOXN1O15353 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
FOXN1O15353 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
FOXN1O15353 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
FOXN1O15353 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.14■■□□□ 1.78
FOXN1O15353 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.14■■□□□ 1.78
FOXN1O15353 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
FOXN1O15353 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.14■■□□□ 1.78
FOXN1O15353 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
FOXN1O15353 AC133041.1-202ENST00000642053 222 ntBASIC26.14■■□□□ 1.78
FOXN1O15353 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
FOXN1O15353 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
FOXN1O15353 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
FOXN1O15353 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.14■■□□□ 1.77
FOXN1O15353 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
FOXN1O15353 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.77
FOXN1O15353 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
FOXN1O15353 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.13■■□□□ 1.77
FOXN1O15353 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
FOXN1O15353 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
FOXN1O15353 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.12■■□□□ 1.77
FOXN1O15353 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
FOXN1O15353 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
FOXN1O15353 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.12■■□□□ 1.77
FOXN1O15353 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
FOXN1O15353 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.11■■□□□ 1.77
FOXN1O15353 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
FOXN1O15353 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
FOXN1O15353 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
FOXN1O15353 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
FOXN1O15353 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.1■■□□□ 1.77
FOXN1O15353 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.1■■□□□ 1.77
FOXN1O15353 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
FOXN1O15353 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
FOXN1O15353 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.1■■□□□ 1.77
FOXN1O15353 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.1■■□□□ 1.77
FOXN1O15353 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.1■■□□□ 1.77
FOXN1O15353 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.1■■□□□ 1.77
FOXN1O15353 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.1■■□□□ 1.77
FOXN1O15353 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.1■■□□□ 1.77
FOXN1O15353 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
FOXN1O15353 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.1■■□□□ 1.77
FOXN1O15353 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
FOXN1O15353 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
FOXN1O15353 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
FOXN1O15353 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.09■■□□□ 1.77
FOXN1O15353 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
FOXN1O15353 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.09■■□□□ 1.77
FOXN1O15353 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.09■■□□□ 1.77
FOXN1O15353 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.09■■□□□ 1.77
FOXN1O15353 DUSP5P2-201ENST00000426873 1033 ntBASIC26.09■■□□□ 1.77
FOXN1O15353 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.09■■□□□ 1.77
FOXN1O15353 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.09■■□□□ 1.77
FOXN1O15353 AC098934.4-201ENST00000564127 592 ntBASIC26.09■■□□□ 1.77
FOXN1O15353 AC010525.1-201ENST00000585559 441 ntBASIC26.09■■□□□ 1.77
FOXN1O15353 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
FOXN1O15353 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
FOXN1O15353 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
FOXN1O15353 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.08■■□□□ 1.77
FOXN1O15353 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.08■■□□□ 1.77
FOXN1O15353 RPS2P4-201ENST00000476944 856 ntBASIC26.08■■□□□ 1.77
FOXN1O15353 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.08■■□□□ 1.77
FOXN1O15353 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.08■■□□□ 1.77
FOXN1O15353 MFSD11-216ENST00000590393 1141 ntBASIC26.08■■□□□ 1.77
FOXN1O15353 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
FOXN1O15353 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
FOXN1O15353 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.08■■□□□ 1.77
FOXN1O15353 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
FOXN1O15353 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
FOXN1O15353 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
FOXN1O15353 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.08■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms