Protein–RNA interactions for Protein: O00425

IGF2BP3, Insulin-like growth factor 2 mRNA-binding protein 3, humanhuman

Known RBP eCLIP

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGF2BP3O00425 HNRNPU-218ENST00000639064 2625 ntTSL 510.35□□□□□ -0.752e-8■□□□□ 8.3
IGF2BP3O00425 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC10.13□□□□□ -0.792e-8■□□□□ 8.3
IGF2BP3O00425 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC9.03□□□□□ -0.962e-8■□□□□ 8.3
IGF2BP3O00425 HNRNPU-211ENST00000489705 451 ntTSL 38.99□□□□□ -0.972e-8■□□□□ 8.3
IGF2BP3O00425 HNRNPU-222ENST00000639880 4239 ntTSL 58.86□□□□□ -0.992e-8■□□□□ 8.3
IGF2BP3O00425 HNRNPU-207ENST00000468690 5273 ntTSL 58.07□□□□□ -1.122e-8■□□□□ 8.3
IGF2BP3O00425 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.04□□□□□ -1.122e-8■□□□□ 8.3
IGF2BP3O00425 HNRNPU-208ENST00000475997 5290 ntTSL 56.37□□□□□ -1.392e-8■□□□□ 8.3
IGF2BP3O00425 HNRNPU-203ENST00000366527 12852 ntTSL 24.05□□□□□ -1.762e-8■□□□□ 8.3
IGF2BP3O00425 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.79e-7■□□□□ 8.3
IGF2BP3O00425 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.569e-7■□□□□ 8.3
IGF2BP3O00425 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.389e-7■□□□□ 8.3
IGF2BP3O00425 NOMO1-204ENST00000566823 1898 ntTSL 213.75□□□□□ -0.219e-7■□□□□ 8.3
IGF2BP3O00425 NOMO1-202ENST00000565655 666 ntTSL 312.78□□□□□ -0.369e-7■□□□□ 8.3
IGF2BP3O00425 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC28.08■■■□□ 2.091e-6■□□□□ 8.3
IGF2BP3O00425 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.461e-6■□□□□ 8.3
IGF2BP3O00425 NACA-207ENST00000546917 299 ntTSL 29.63□□□□□ -0.871e-10■□□□□ 8.3
IGF2BP3O00425 FN1-217ENST00000471193 496 ntTSL 313.41□□□□□ -0.265e-71■□□□□ 8.2
IGF2BP3O00425 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.52e-6■□□□□ 8.2
IGF2BP3O00425 PTBP1-205ENST00000585535 314 ntTSL 314.03□□□□□ -0.162e-6■□□□□ 8.2
IGF2BP3O00425 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.172e-6■□□□□ 8.2
IGF2BP3O00425 PTBP1-213ENST00000587191 357 ntTSL 513.94□□□□□ -0.182e-6■□□□□ 8.2
IGF2BP3O00425 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-6■□□□□ 8.2
IGF2BP3O00425 NQO1-207ENST00000569118 519 ntTSL 212.08□□□□□ -0.482e-6■□□□□ 8.2
IGF2BP3O00425 NQO1-204ENST00000439109 924 ntTSL 2 BASIC9.04□□□□□ -0.962e-6■□□□□ 8.2
IGF2BP3O00425 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.31□□□□□ -1.082e-6■□□□□ 8.2
IGF2BP3O00425 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.07□□□□□ -1.442e-6■□□□□ 8.2
IGF2BP3O00425 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.524e-8■□□□□ 8.2
IGF2BP3O00425 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.894e-8■□□□□ 8.2
IGF2BP3O00425 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.84e-8■□□□□ 8.2
IGF2BP3O00425 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.234e-8■□□□□ 8.2
IGF2BP3O00425 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.53■□□□□ 0.241e-6■□□□□ 8.2
IGF2BP3O00425 SLC38A2-204ENST00000548111 583 ntTSL 49.17□□□□□ -0.941e-6■□□□□ 8.2
IGF2BP3O00425 SLC38A2-205ENST00000548236 865 ntTSL 27.77□□□□□ -1.171e-6■□□□□ 8.2
IGF2BP3O00425 C3-211ENST00000599668 627 ntTSL 311.74□□□□□ -0.536e-12■□□□□ 8.2
IGF2BP3O00425 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.093e-9■□□□□ 8.1
IGF2BP3O00425 FN1-223ENST00000490833 699 ntTSL 36.58□□□□□ -1.367e-41■□□□□ 8.1
IGF2BP3O00425 RAB5C-204ENST00000547517 1167 ntTSL 1 (best) BASIC14.3□□□□□ -0.124e-6■□□□□ 8.1
IGF2BP3O00425 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.041e-6■□□□□ 8.1
IGF2BP3O00425 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.08■□□□□ 0.971e-6■□□□□ 8.1
IGF2BP3O00425 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.42■□□□□ 0.861e-6■□□□□ 8.1
IGF2BP3O00425 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.611e-6■□□□□ 8.1
IGF2BP3O00425 ATG9A-220ENST00000475339 812 ntTSL 218.5■□□□□ 0.551e-6■□□□□ 8.1
IGF2BP3O00425 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.534e-9■□□□□ 8.1
IGF2BP3O00425 ATG9A-215ENST00000446716 5245 ntTSL 218.24■□□□□ 0.511e-6■□□□□ 8.1
IGF2BP3O00425 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.92■□□□□ 0.144e-9■□□□□ 8.1
IGF2BP3O00425 SCAMP4-207ENST00000472442 2973 ntTSL 214.16□□□□□ -0.144e-9■□□□□ 8.1
IGF2BP3O00425 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.42e-8■□□□□ 8.1
IGF2BP3O00425 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.72e-8■□□□□ 8.1
Retrieved 49 of 3,649 protein–RNA pairs in 34.9 ms