Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC7O00311 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC7O00311 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC7O00311 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC7O00311 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDC7O00311 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CDC7O00311 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC7O00311 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CDC7O00311 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC7O00311 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC7O00311 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC7O00311 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC7O00311 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
CDC7O00311 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDC7O00311 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CDC7O00311 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CDC7O00311 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CDC7O00311 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC7O00311 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC7O00311 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC7O00311 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC7O00311 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CDC7O00311 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
CDC7O00311 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC7O00311 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.45■■□□□ 1.02
CDC7O00311 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC7O00311 CA15P2-201ENST00000611168 834 ntBASIC21.45■■□□□ 1.02
CDC7O00311 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC7O00311 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC7O00311 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.45■■□□□ 1.02
CDC7O00311 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC7O00311 C11orf96-202ENST00000528572 1834 ntBASIC21.45■■□□□ 1.02
CDC7O00311 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC7O00311 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.45■■□□□ 1.02
CDC7O00311 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDC7O00311 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CDC7O00311 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC7O00311 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC7O00311 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDC7O00311 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC7O00311 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDC7O00311 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC7O00311 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDC7O00311 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.44■■□□□ 1.02
CDC7O00311 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC7O00311 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC7O00311 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC7O00311 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC7O00311 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.43■■□□□ 1.02
CDC7O00311 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC7O00311 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.43■■□□□ 1.02
CDC7O00311 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC7O00311 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC7O00311 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.43■■□□□ 1.02
CDC7O00311 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC7O00311 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC7O00311 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC7O00311 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CDC7O00311 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC7O00311 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC7O00311 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC7O00311 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC7O00311 AC131281.2-201ENST00000520478 145 ntBASIC21.42■■□□□ 1.02
CDC7O00311 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CDC7O00311 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC7O00311 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC7O00311 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CDC7O00311 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.41■■□□□ 1.02
CDC7O00311 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.41■■□□□ 1.02
CDC7O00311 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.41■■□□□ 1.02
CDC7O00311 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.41■■□□□ 1.02
CDC7O00311 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC7O00311 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC7O00311 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.4■■□□□ 1.02
CDC7O00311 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDC7O00311 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC7O00311 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC7O00311 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDC7O00311 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC7O00311 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDC7O00311 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.4■■□□□ 1.02
CDC7O00311 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.4■■□□□ 1.02
CDC7O00311 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC7O00311 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.02
CDC7O00311 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.39■■□□□ 1.02
CDC7O00311 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.39■■□□□ 1.02
CDC7O00311 CLDN5-201ENST00000403084 2357 ntBASIC21.39■■□□□ 1.02
CDC7O00311 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.39■■□□□ 1.02
CDC7O00311 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.39■■□□□ 1.02
CDC7O00311 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC7O00311 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms