Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC092667.1-201ENST00000434301 2586 ntBASIC15.92■□□□□ 0.14
SMKR1H3BMG3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMKR1H3BMG3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 AL121603.2-201ENST00000557373 2117 ntBASIC15.91■□□□□ 0.14
SMKR1H3BMG3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.91■□□□□ 0.14
SMKR1H3BMG3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
SMKR1H3BMG3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
SMKR1H3BMG3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SMKR1H3BMG3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 AF106564.1-201ENST00000607058 2553 ntBASIC15.89■□□□□ 0.13
SMKR1H3BMG3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 AC011551.1-201ENST00000614101 683 ntBASIC15.89■□□□□ 0.13
SMKR1H3BMG3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMKR1H3BMG3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMKR1H3BMG3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMKR1H3BMG3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMKR1H3BMG3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMKR1H3BMG3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SMKR1H3BMG3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SMKR1H3BMG3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.87■□□□□ 0.13
SMKR1H3BMG3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.87■□□□□ 0.13
SMKR1H3BMG3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMKR1H3BMG3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
SMKR1H3BMG3 AL592293.1-201ENST00000502889 1188 ntBASIC15.87■□□□□ 0.13
SMKR1H3BMG3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms