Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 ECEL1P3-201ENST00000427961 737 ntBASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 RARRES2P4-201ENST00000514074 484 ntBASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 AC013268.1-206ENST00000638368 961 ntBASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 AC112229.1-201ENST00000639295 961 ntBASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL6A6A6NMZ7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 UNC93B4-201ENST00000505679 747 ntBASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.9■□□□□ 0.78
COL6A6A6NMZ7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL6A6A6NMZ7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.89■□□□□ 0.78
COL6A6A6NMZ7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL6A6A6NMZ7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL6A6A6NMZ7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
COL6A6A6NMZ7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL6A6A6NMZ7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 AC073912.3-201ENST00000624414 853 ntBASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
COL6A6A6NMZ7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 FAM210CP-201ENST00000445714 574 ntBASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A6A6NMZ7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 MYC-209ENST00000641252 345 ntBASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A6A6NMZ7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL6A6A6NMZ7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A6A6NMZ7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COL6A6A6NMZ7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.86■□□□□ 0.77
COL6A6A6NMZ7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A6A6NMZ7 AC006058.3-201ENST00000606217 1069 ntBASIC19.86■□□□□ 0.77
COL6A6A6NMZ7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A6A6NMZ7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A6A6NMZ7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms