Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TVP23AA6NH52 FBXW4P1-201ENST00000426721 2239 ntBASIC19.45■□□□□ 0.7
TVP23AA6NH52 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.45■□□□□ 0.7
TVP23AA6NH52 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.45■□□□□ 0.7
TVP23AA6NH52 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.45■□□□□ 0.7
TVP23AA6NH52 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TVP23AA6NH52 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TVP23AA6NH52 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TVP23AA6NH52 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.45■□□□□ 0.7
TVP23AA6NH52 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TVP23AA6NH52 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TVP23AA6NH52 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TVP23AA6NH52 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TVP23AA6NH52 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TVP23AA6NH52 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TVP23AA6NH52 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TVP23AA6NH52 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.44■□□□□ 0.7
TVP23AA6NH52 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TVP23AA6NH52 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TVP23AA6NH52 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TVP23AA6NH52 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.44■□□□□ 0.7
TVP23AA6NH52 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TVP23AA6NH52 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.44■□□□□ 0.7
TVP23AA6NH52 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TVP23AA6NH52 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TVP23AA6NH52 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.44■□□□□ 0.7
TVP23AA6NH52 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TVP23AA6NH52 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TVP23AA6NH52 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TVP23AA6NH52 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TVP23AA6NH52 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TVP23AA6NH52 MIR6724-1-201ENST00000616420 92 ntBASIC19.43■□□□□ 0.7
TVP23AA6NH52 MIR6724-2-201ENST00000616483 92 ntBASIC19.43■□□□□ 0.7
TVP23AA6NH52 MIR6724-4-201ENST00000617390 92 ntBASIC19.43■□□□□ 0.7
TVP23AA6NH52 MIR6724-3-201ENST00000622482 92 ntBASIC19.43■□□□□ 0.7
TVP23AA6NH52 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TVP23AA6NH52 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.43■□□□□ 0.7
TVP23AA6NH52 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.43■□□□□ 0.7
TVP23AA6NH52 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TVP23AA6NH52 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TVP23AA6NH52 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TVP23AA6NH52 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TVP23AA6NH52 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TVP23AA6NH52 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TVP23AA6NH52 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TVP23AA6NH52 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
TVP23AA6NH52 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TVP23AA6NH52 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TVP23AA6NH52 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TVP23AA6NH52 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TVP23AA6NH52 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TVP23AA6NH52 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TVP23AA6NH52 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TVP23AA6NH52 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TVP23AA6NH52 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TVP23AA6NH52 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.41■□□□□ 0.7
TVP23AA6NH52 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.41■□□□□ 0.7
TVP23AA6NH52 AL117332.1-201ENST00000622628 974 ntBASIC19.41■□□□□ 0.7
TVP23AA6NH52 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.41■□□□□ 0.7
TVP23AA6NH52 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
TVP23AA6NH52 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TVP23AA6NH52 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.41■□□□□ 0.7
TVP23AA6NH52 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.4■□□□□ 0.7
TVP23AA6NH52 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.4■□□□□ 0.7
TVP23AA6NH52 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.4■□□□□ 0.7
TVP23AA6NH52 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TVP23AA6NH52 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TVP23AA6NH52 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.4■□□□□ 0.7
TVP23AA6NH52 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.4■□□□□ 0.7
TVP23AA6NH52 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.4■□□□□ 0.7
TVP23AA6NH52 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TVP23AA6NH52 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TVP23AA6NH52 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TVP23AA6NH52 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.39■□□□□ 0.7
TVP23AA6NH52 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
TVP23AA6NH52 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TVP23AA6NH52 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TVP23AA6NH52 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.39■□□□□ 0.69
TVP23AA6NH52 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TVP23AA6NH52 KRT16P3-201ENST00000439127 1283 ntBASIC19.39■□□□□ 0.69
TVP23AA6NH52 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.39■□□□□ 0.69
TVP23AA6NH52 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.39■□□□□ 0.69
TVP23AA6NH52 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.39■□□□□ 0.69
TVP23AA6NH52 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TVP23AA6NH52 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TVP23AA6NH52 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TVP23AA6NH52 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TVP23AA6NH52 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TVP23AA6NH52 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TVP23AA6NH52 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TVP23AA6NH52 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TVP23AA6NH52 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TVP23AA6NH52 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TVP23AA6NH52 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TVP23AA6NH52 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TVP23AA6NH52 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TVP23AA6NH52 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TVP23AA6NH52 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
TVP23AA6NH52 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TVP23AA6NH52 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms