Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUXBA0A1W2PPF3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 DUX4L4-201ENST00000566884 1269 ntBASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 U85056.1-201ENST00000616429 682 ntBASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 AC005229.4-201ENST00000610085 2198 ntBASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.79■□□□□ 0.44
DUXBA0A1W2PPF3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 SNX5-217ENST00000606557 1087 ntBASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DUXBA0A1W2PPF3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 AC074183.2-201ENST00000623112 922 ntBASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DUXBA0A1W2PPF3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DUXBA0A1W2PPF3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DUXBA0A1W2PPF3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DUXBA0A1W2PPF3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
DUXBA0A1W2PPF3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 KRT18P60-201ENST00000312876 1297 ntBASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DUXBA0A1W2PPF3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DUXBA0A1W2PPF3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 Z98882.1-201ENST00000622160 2253 ntBASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 RARRES2P2-201ENST00000394842 485 ntBASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUXBA0A1W2PPF3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms