Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 KRT18P60-201ENST00000312876 1297 ntBASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 AC074183.2-201ENST00000623112 922 ntBASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 FEM1AP4-201ENST00000443167 1987 ntBASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.33■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 LINC01521-201ENST00000504184 1943 ntBASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AC073130.3-201ENST00000624389 2278 ntBASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-1A0A0K0K1D8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-1A0A0K0K1D8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AC005703.6-201ENST00000623265 1329 ntBASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-1A0A0K0K1D8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-1A0A0K0K1D8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 RARRES2P2-201ENST00000394842 485 ntBASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-1A0A0K0K1D8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms