Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 AC021242.3-201ENST00000607598 1377 ntBASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 YBX1P4-201ENST00000392794 808 ntBASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-5A0A0J9YX44 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV5-5A0A0J9YX44 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 KRT8P33-201ENST00000508125 1423 ntBASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 AC009102.2-201ENST00000606772 1639 ntBASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-5A0A0J9YX44 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.94■□□□□ 0.62
TRBV5-5A0A0J9YX44 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 AL031848.2-201ENST00000607670 837 ntBASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-5A0A0J9YX44 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-5A0A0J9YX44 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-5A0A0J9YX44 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-5A0A0J9YX44 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.92■□□□□ 0.62
TRBV5-5A0A0J9YX44 AC012354.3-201ENST00000623734 483 ntBASIC18.92■□□□□ 0.62
TRBV5-5A0A0J9YX44 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRBV5-5A0A0J9YX44 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-5A0A0J9YX44 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.92■□□□□ 0.62
TRBV5-5A0A0J9YX44 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRBV5-5A0A0J9YX44 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 Z98882.1-201ENST00000622160 2253 ntBASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms