Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 AL499627.2-201ENST00000606283 725 ntBASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 AC087742.1-201ENST00000575880 1738 ntBASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV4A0A0B4J268 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 MIR3621-201ENST00000580529 85 ntBASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV4A0A0B4J268 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV4A0A0B4J268 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV4A0A0B4J268 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRAV4A0A0B4J268 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 AC092171.4-201ENST00000609130 632 ntBASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV4A0A0B4J268 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 EP400NL-214ENST00000641289 2402 ntBASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 SRD5A1P1-201ENST00000442297 786 ntBASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms