Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 U85056.1-201ENST00000616429 682 ntBASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV1-2A0A0B4J238 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 DUX4L4-201ENST00000566884 1269 ntBASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV1-2A0A0B4J238 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 SNX5-217ENST00000606557 1087 ntBASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 FEM1AP4-201ENST00000443167 1987 ntBASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV1-2A0A0B4J238 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV1-2A0A0B4J238 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 KRT18P60-201ENST00000312876 1297 ntBASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAV1-2A0A0B4J238 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 LINC01521-201ENST00000504184 1943 ntBASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV1-2A0A0B4J238 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms