Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PRICKLE4Q2TBC4 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PRICKLE4Q2TBC4 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AP001198.1-201ENST00000586278 1852 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 PTPRD-AS2-201ENST00000429581 2838 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 HINFP-204ENST00000527410 1466 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 FAM90A11P-201ENST00000518378 2218 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AL359510.2-201ENST00000624958 2249 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC009108.4-201ENST00000623284 2451 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 PRPS2-202ENST00000380668 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 RBMY2FP-201ENST00000303922 2042 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 SNORA57-201ENST00000383870 149 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 RPL17P34-201ENST00000394133 555 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 PGAM1P10-201ENST00000402426 761 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 RN7SL16P-201ENST00000476316 269 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AF186996.6-201ENST00000485294 149 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC092612.1-201ENST00000514501 998 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 NT5CP1-201ENST00000554092 509 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 RN7SL596P-201ENST00000582123 288 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 MIR4526-201ENST00000583168 87 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC092301.1-201ENST00000601618 764 ntTSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 LINC01206-212ENST00000609168 988 ntTSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AL137028.2-201ENST00000614601 256 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC005746.3-201ENST00000614751 393 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC020917.3-201ENST00000621050 721 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC091941.1-201ENST00000623003 576 ntBASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 ANKRD20A4-201ENST00000357336 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 METTL4-203ENST00000574538 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 AC240565.1-201ENST00000624936 1373 ntTSL 5 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRICKLE4Q2TBC4 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.77□□□□□ -0.52
PRICKLE4Q2TBC4 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC11.77□□□□□ -0.52
PRICKLE4Q2TBC4 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.77□□□□□ -0.52
PRICKLE4Q2TBC4 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PRICKLE4Q2TBC4 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PRICKLE4Q2TBC4 CLCN6-206ENST00000376496 2922 ntTSL 5 BASIC11.77□□□□□ -0.52
PRICKLE4Q2TBC4 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PRICKLE4Q2TBC4 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC11.77□□□□□ -0.52
PRICKLE4Q2TBC4 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms