Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SLC1A1P43005 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC1A1P43005 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SLC1A1P43005 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC1A1P43005 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC13.35□□□□□ -0.27
SLC1A1P43005 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 RPS19P3-201ENST00000480487 441 ntBASIC13.35□□□□□ -0.27
SLC1A1P43005 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC13.35□□□□□ -0.27
SLC1A1P43005 AC104117.1-201ENST00000517817 900 ntBASIC13.35□□□□□ -0.27
SLC1A1P43005 TREHP1-201ENST00000531328 465 ntBASIC13.35□□□□□ -0.27
SLC1A1P43005 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC13.35□□□□□ -0.27
SLC1A1P43005 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.35□□□□□ -0.27
SLC1A1P43005 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SLC1A1P43005 AP000769.1-203ENST00000637245 208 ntBASIC13.35□□□□□ -0.27
SLC1A1P43005 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SLC1A1P43005 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC13.35□□□□□ -0.27
SLC1A1P43005 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC1A1P43005 ZNF483-203ENST00000358151 2433 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC1A1P43005 AC015818.9-201ENST00000591705 4582 ntBASIC13.35□□□□□ -0.27
SLC1A1P43005 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC13.35□□□□□ -0.27
SLC1A1P43005 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC13.35□□□□□ -0.27
SLC1A1P43005 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 LILRA2-202ENST00000251377 1799 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SLC1A1P43005 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SLC1A1P43005 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
SLC1A1P43005 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC13.34□□□□□ -0.27
SLC1A1P43005 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.34□□□□□ -0.27
SLC1A1P43005 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SLC1A1P43005 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SLC1A1P43005 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SLC1A1P43005 AQP7P1-201ENST00000412626 1045 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 GCSHP3-201ENST00000431120 391 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 IFNWP2-201ENST00000431203 580 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 HLA-W-207ENST00000439514 771 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 AQP7P2-201ENST00000453967 1041 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 KRT18P26-201ENST00000454475 1281 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 RN7SL789P-201ENST00000478944 293 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 RN7SL818P-201ENST00000485099 259 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 RPL29P2-201ENST00000488409 460 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.34□□□□□ -0.27
SLC1A1P43005 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC13.34□□□□□ -0.27
SLC1A1P43005 KRT8P34-201ENST00000577607 1044 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 RN7SL725P-201ENST00000606439 259 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 AC123912.6-201ENST00000612657 315 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 AC010601.2-201ENST00000623060 774 ntBASIC13.34□□□□□ -0.27
SLC1A1P43005 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.34□□□□□ -0.27
SLC1A1P43005 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC13.34□□□□□ -0.27
SLC1A1P43005 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC13.34□□□□□ -0.27
SLC1A1P43005 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.34□□□□□ -0.27
SLC1A1P43005 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 GSTA2-201ENST00000493422 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 GRM3-203ENST00000439827 1811 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 HYDIN-209ENST00000538248 3152 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 GEMIN8-202ENST00000380523 1682 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SLC1A1P43005 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC1A1P43005 LMCD1-202ENST00000397386 1501 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC1A1P43005 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
SLC1A1P43005 WASH7P-201ENST00000488147 1351 ntBASIC13.33□□□□□ -0.27
SLC1A1P43005 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC13.33□□□□□ -0.27
SLC1A1P43005 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms