Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AC010997.1-201ENST00000447646 350 ntBASIC12.71□□□□□ -0.37
SATB2Q9UPW6 RN7SL794P-201ENST00000469816 280 ntBASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AK2-208ENST00000487289 920 ntTSL 2 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AL450346.2-201ENST00000495602 1024 ntBASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AC022447.5-201ENST00000504817 392 ntBASIC12.71□□□□□ -0.37
SATB2Q9UPW6 CCNL2P1-201ENST00000512846 969 ntBASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 AL109954.3-201ENST00000615088 558 ntBASIC12.71□□□□□ -0.37
SATB2Q9UPW6 NF1P11-201ENST00000621292 1282 ntBASIC12.71□□□□□ -0.37
SATB2Q9UPW6 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SATB2Q9UPW6 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
SATB2Q9UPW6 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 PCDHB19P-202ENST00000625133 2914 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 AP001331.1-201ENST00000413008 1015 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 ASLP1-201ENST00000428790 637 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 AC093106.1-201ENST00000437271 352 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 RN7SL789P-201ENST00000478944 293 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 AC108724.1-201ENST00000481669 352 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 AL512324.3-201ENST00000619383 882 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 AL445209.1-201ENST00000607269 3491 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 ATF4P4-201ENST00000393544 1930 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 PCDHA6-201ENST00000378126 3267 ntBASIC12.7□□□□□ -0.38
SATB2Q9UPW6 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SATB2Q9UPW6 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SATB2Q9UPW6 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms