Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 IDS-203ENST00000428056 1213 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.19□□□□□ -0.46
SCN2BO60939 KRT18P63-201ENST00000505463 979 ntBASIC12.19□□□□□ -0.46
SCN2BO60939 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.19□□□□□ -0.46
SCN2BO60939 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 MIR4649-201ENST00000582839 64 ntBASIC12.19□□□□□ -0.46
SCN2BO60939 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.19□□□□□ -0.46
SCN2BO60939 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SCN2BO60939 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC12.19□□□□□ -0.46
SCN2BO60939 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC12.19□□□□□ -0.46
SCN2BO60939 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC12.19□□□□□ -0.46
SCN2BO60939 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 PRPF4-202ENST00000374199 3212 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC12.19□□□□□ -0.46
SCN2BO60939 IFT74-201ENST00000380062 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC12.19□□□□□ -0.46
SCN2BO60939 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC12.19□□□□□ -0.46
SCN2BO60939 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 APOL3-201ENST00000349314 2117 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SCN2BO60939 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SCN2BO60939 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 AL353759.1-201ENST00000635439 1578 ntTSL 5 BASIC12.18□□□□□ -0.46
SCN2BO60939 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SCN2BO60939 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.18□□□□□ -0.46
SCN2BO60939 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.18□□□□□ -0.46
SCN2BO60939 PRADC1P1-201ENST00000412317 525 ntBASIC12.18□□□□□ -0.46
SCN2BO60939 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC12.18□□□□□ -0.46
SCN2BO60939 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.18□□□□□ -0.46
SCN2BO60939 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 AL121574.1-201ENST00000415890 419 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.18□□□□□ -0.46
SCN2BO60939 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.18□□□□□ -0.46
SCN2BO60939 OARD1-214ENST00000486443 764 ntTSL 3 BASIC12.18□□□□□ -0.46
SCN2BO60939 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 ALG1L7P-201ENST00000502317 768 ntBASIC12.18□□□□□ -0.46
SCN2BO60939 PHBP18-201ENST00000546648 813 ntBASIC12.18□□□□□ -0.46
SCN2BO60939 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SCN2BO60939 MEP1AP1-201ENST00000636082 1097 ntBASIC12.18□□□□□ -0.46
SCN2BO60939 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 AC025538.1-201ENST00000510707 1486 ntBASIC12.18□□□□□ -0.46
SCN2BO60939 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 DCAKD-202ENST00000342350 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
SCN2BO60939 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 MTMR2-202ENST00000352297 3350 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 MVK-202ENST00000392727 1770 ntTSL 2 BASIC12.18□□□□□ -0.46
SCN2BO60939 LILRP2-202ENST00000413572 1383 ntBASIC12.18□□□□□ -0.46
SCN2BO60939 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SCN2BO60939 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms