Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 FP325332.1-201ENST00000624818 2045 ntBASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 Z69890.1-201ENST00000382990 339 ntBASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 AC007274.1-201ENST00000439805 662 ntBASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 EEF1DP6-201ENST00000449232 372 ntBASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 NOC2LP1-201ENST00000450578 752 ntBASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 NSD1-211ENST00000511258 809 ntTSL 3 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 RPS23-207ENST00000511844 530 ntTSL 2 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 AP002803.1-201ENST00000528836 498 ntBASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 AC023509.4-201ENST00000602306 775 ntBASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 AC005041.3-201ENST00000606287 649 ntBASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
POLR2J2Q9GZM3 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 UBTFL8-201ENST00000426903 2112 ntBASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 LRRC8E-206ENST00000618098 3743 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
POLR2J2Q9GZM3 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 AC053503.6-201ENST00000623864 1843 ntBASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 MKRN7P-201ENST00000433469 1371 ntBASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 RPL13AP19-201ENST00000434320 584 ntBASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 AC008026.2-201ENST00000495438 348 ntBASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 CR383656.3-201ENST00000551315 183 ntBASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 RPL17P45-201ENST00000586289 509 ntBASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 AC211476.2-201ENST00000608799 708 ntBASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 AC002044.2-201ENST00000624910 970 ntBASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC11.95□□□□□ -0.5
POLR2J2Q9GZM3 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms