Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 NF2-207ENST00000397789 1857 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 AL353759.1-201ENST00000635439 1578 ntTSL 5 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 OR2T32P-201ENST00000403423 963 ntBASIC10.49□□□□□ -0.73
RAB40CQ96S21 OR52M2P-201ENST00000414298 959 ntBASIC10.49□□□□□ -0.73
RAB40CQ96S21 ACTG1P2-201ENST00000415776 1125 ntBASIC10.49□□□□□ -0.73
RAB40CQ96S21 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 ACTG1P11-201ENST00000425411 1125 ntBASIC10.49□□□□□ -0.73
RAB40CQ96S21 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 AC005077.2-201ENST00000449786 690 ntBASIC10.49□□□□□ -0.73
RAB40CQ96S21 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 RN7SL258P-201ENST00000478664 300 ntBASIC10.49□□□□□ -0.73
RAB40CQ96S21 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 NAT9-220ENST00000582870 896 ntTSL 5 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 AC103810.3-201ENST00000583567 96 ntBASIC10.49□□□□□ -0.73
RAB40CQ96S21 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 DUX4L33-201ENST00000635217 958 ntBASIC10.49□□□□□ -0.73
RAB40CQ96S21 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 BTN2A2-206ENST00000469230 1790 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 TADA2B-205ENST00000515646 3818 ntBASIC10.49□□□□□ -0.73
RAB40CQ96S21 GRM3-203ENST00000439827 1811 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
RAB40CQ96S21 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 KCNJ3-203ENST00000544049 4523 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 NTM-221ENST00000539799 2550 ntTSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 LRRC8A-202ENST00000372599 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 EME1-207ENST00000511648 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 KRTAP19-9P-201ENST00000421795 191 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 CALR4P-201ENST00000431943 946 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 REEP1-202ENST00000453231 940 ntTSL 2 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 AC012618.1-201ENST00000461223 412 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 AC025186.1-201ENST00000478174 870 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 RN7SL564P-201ENST00000496309 250 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 AC100858.1-201ENST00000514059 1228 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 IGHVII-33-1-201ENST00000524010 280 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 AL132994.1-201ENST00000554098 400 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 AL161670.2-201ENST00000557650 1227 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 IRF3-215ENST00000596822 823 ntTSL 3 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 AL109837.1-201ENST00000603272 613 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 MIR6787-201ENST00000616675 61 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 LYPD5-201ENST00000377950 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 MSANTD2P1-201ENST00000445341 1368 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 AC092115.1-201ENST00000566277 1402 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 PIK3R5-218ENST00000611902 4339 ntTSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 MRGPRX2-201ENST00000329773 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms