Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26■■□□□ 1.75
CYP46A1Q9Y6A2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CYP46A1Q9Y6A2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CYP46A1Q9Y6A2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26■■□□□ 1.75
CYP46A1Q9Y6A2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 AC137767.1-201ENST00000602918 1920 ntBASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CYP46A1Q9Y6A2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 AL512631.2-201ENST00000604634 923 ntBASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 pRNA.6-201ENST00000610482 90 ntBASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 pRNA.5-201ENST00000612139 90 ntBASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 pRNA.11-201ENST00000618423 90 ntBASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 pRNA.13-201ENST00000619112 90 ntBASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 AC133637.1-201ENST00000624115 1537 ntBASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.98■■□□□ 1.75
CYP46A1Q9Y6A2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 CA15P2-201ENST00000611168 834 ntBASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CYP46A1Q9Y6A2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 C11orf96-202ENST00000528572 1834 ntBASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 SRD5A1P1-201ENST00000442297 786 ntBASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CYP46A1Q9Y6A2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.75
CYP46A1Q9Y6A2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.95■■□□□ 1.75
CYP46A1Q9Y6A2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
CYP46A1Q9Y6A2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CYP46A1Q9Y6A2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
CYP46A1Q9Y6A2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.94■■□□□ 1.74
CYP46A1Q9Y6A2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 MIR3181-201ENST00000578512 73 ntBASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CYP46A1Q9Y6A2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CYP46A1Q9Y6A2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CYP46A1Q9Y6A2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms