Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA2Q9Y5H9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 AL358852.1-201ENST00000623174 1268 ntBASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHA2Q9Y5H9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA2Q9Y5H9 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.59■■□□□ 1.53
PCDHA2Q9Y5H9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.59■■□□□ 1.53
PCDHA2Q9Y5H9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHA2Q9Y5H9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA2Q9Y5H9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA2Q9Y5H9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA2Q9Y5H9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
PCDHA2Q9Y5H9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
PCDHA2Q9Y5H9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA2Q9Y5H9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA2Q9Y5H9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PCDHA2Q9Y5H9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHA2Q9Y5H9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA2Q9Y5H9 YBX1P1-201ENST00000445822 960 ntBASIC24.58■■□□□ 1.53
PCDHA2Q9Y5H9 AP005435.1-201ENST00000529293 1178 ntBASIC24.58■■□□□ 1.53
PCDHA2Q9Y5H9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
PCDHA2Q9Y5H9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA2Q9Y5H9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.58■■□□□ 1.52
PCDHA2Q9Y5H9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA2Q9Y5H9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA2Q9Y5H9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA2Q9Y5H9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.57■■□□□ 1.52
PCDHA2Q9Y5H9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
PCDHA2Q9Y5H9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA2Q9Y5H9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHA2Q9Y5H9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHA2Q9Y5H9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 AC027612.3-201ENST00000413684 1047 ntBASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA2Q9Y5H9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 AC012414.1-201ENST00000556676 535 ntBASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 AL354811.1-201ENST00000610286 706 ntBASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA2Q9Y5H9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHA2Q9Y5H9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA2Q9Y5H9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PCDHA2Q9Y5H9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA2Q9Y5H9 AC034268.1-201ENST00000441047 882 ntBASIC24.53■■□□□ 1.52
PCDHA2Q9Y5H9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
PCDHA2Q9Y5H9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms