Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHB2Q9Y5E7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB2Q9Y5E7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
PCDHB2Q9Y5E7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB2Q9Y5E7 AC123595.1-201ENST00000440769 1046 ntBASIC24.02■■□□□ 1.44
PCDHB2Q9Y5E7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB2Q9Y5E7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB2Q9Y5E7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHB2Q9Y5E7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB2Q9Y5E7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB2Q9Y5E7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
PCDHB2Q9Y5E7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB2Q9Y5E7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB2Q9Y5E7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
PCDHB2Q9Y5E7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHB2Q9Y5E7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.01■■□□□ 1.43
PCDHB2Q9Y5E7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB2Q9Y5E7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 DUX4L2-201ENST00000561772 1275 ntBASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 DUX4L6-201ENST00000626483 1275 ntBASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 DUX4L1-201ENST00000627662 1275 ntBASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 DUX4L8-201ENST00000629013 1275 ntBASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 DUX4L3-201ENST00000630187 1275 ntBASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 DUX4L7-201ENST00000630678 1275 ntBASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 DUX4L5-201ENST00000630834 1275 ntBASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
PCDHB2Q9Y5E7 AC068473.5-201ENST00000616428 2072 ntBASIC23.98■■□□□ 1.43
PCDHB2Q9Y5E7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHB2Q9Y5E7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHB2Q9Y5E7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHB2Q9Y5E7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHB2Q9Y5E7 AC105233.4-201ENST00000642045 216 ntBASIC23.98■■□□□ 1.43
PCDHB2Q9Y5E7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB2Q9Y5E7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PCDHB2Q9Y5E7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB2Q9Y5E7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB2Q9Y5E7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB2Q9Y5E7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
PCDHB2Q9Y5E7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB2Q9Y5E7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB2Q9Y5E7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB2Q9Y5E7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB2Q9Y5E7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHB2Q9Y5E7 C9orf163-202ENST00000624034 2573 ntBASIC23.97■■□□□ 1.43
PCDHB2Q9Y5E7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHB2Q9Y5E7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHB2Q9Y5E7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.95■■□□□ 1.42
PCDHB2Q9Y5E7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB2Q9Y5E7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB2Q9Y5E7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB2Q9Y5E7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.95■■□□□ 1.42
PCDHB2Q9Y5E7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.95■■□□□ 1.42
PCDHB2Q9Y5E7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms