Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00588Q9Y4M8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LINC00588Q9Y4M8 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.04■□□□□ -0
LINC00588Q9Y4M8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00588Q9Y4M8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00588Q9Y4M8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00588Q9Y4M8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
LINC00588Q9Y4M8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.03■□□□□ -0
LINC00588Q9Y4M8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.02■□□□□ -0
LINC00588Q9Y4M8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00588Q9Y4M8 DUSP8P3-201ENST00000399571 1760 ntBASIC15.02□□□□□ -0.01
LINC00588Q9Y4M8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC00588Q9Y4M8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LINC00588Q9Y4M8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LINC00588Q9Y4M8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00588Q9Y4M8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.02□□□□□ -0.01
LINC00588Q9Y4M8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LINC00588Q9Y4M8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 LINC02228-203ENST00000641970 1355 ntBASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00588Q9Y4M8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 DUX4L2-201ENST00000561772 1275 ntBASIC15□□□□□ -0.01
LINC00588Q9Y4M8 CCDC92B-201ENST00000575506 885 ntBASIC15□□□□□ -0.01
LINC00588Q9Y4M8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 DUX4L6-201ENST00000626483 1275 ntBASIC15□□□□□ -0.01
LINC00588Q9Y4M8 DUX4L1-201ENST00000627662 1275 ntBASIC15□□□□□ -0.01
LINC00588Q9Y4M8 DUX4L8-201ENST00000629013 1275 ntBASIC15□□□□□ -0.01
LINC00588Q9Y4M8 DUX4L3-201ENST00000630187 1275 ntBASIC15□□□□□ -0.01
LINC00588Q9Y4M8 DUX4L7-201ENST00000630678 1275 ntBASIC15□□□□□ -0.01
LINC00588Q9Y4M8 DUX4L5-201ENST00000630834 1275 ntBASIC15□□□□□ -0.01
LINC00588Q9Y4M8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 OXCT2P1-201ENST00000447263 1535 ntBASIC15□□□□□ -0.01
LINC00588Q9Y4M8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00588Q9Y4M8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
LINC00588Q9Y4M8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms