Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH1Q9Y2L9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH1Q9Y2L9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.76■□□□□ 0.91
LRCH1Q9Y2L9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.76■□□□□ 0.91
LRCH1Q9Y2L9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.76■□□□□ 0.91
LRCH1Q9Y2L9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH1Q9Y2L9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 ABHD17AP5-201ENST00000580133 923 ntBASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 AC092296.2-201ENST00000589470 999 ntBASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH1Q9Y2L9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH1Q9Y2L9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 LINC01006-201ENST00000333319 2292 ntBASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRCH1Q9Y2L9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 AC087742.1-201ENST00000575880 1738 ntBASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.71■□□□□ 0.91
LRCH1Q9Y2L9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LRCH1Q9Y2L9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 ECEL1P2-201ENST00000461596 1295 ntBASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRCH1Q9Y2L9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms