Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX6Q9UPM6 FAM210CP-201ENST00000445714 574 ntBASIC20.7■□□□□ 0.9
LHX6Q9UPM6 AL158047.1-201ENST00000445918 881 ntBASIC20.7■□□□□ 0.9
LHX6Q9UPM6 DUX4L16-201ENST00000555130 1264 ntBASIC20.7■□□□□ 0.9
LHX6Q9UPM6 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.7■□□□□ 0.9
LHX6Q9UPM6 AC098934.4-201ENST00000564127 592 ntBASIC20.7■□□□□ 0.9
LHX6Q9UPM6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX6Q9UPM6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.7■□□□□ 0.9
LHX6Q9UPM6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX6Q9UPM6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX6Q9UPM6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX6Q9UPM6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX6Q9UPM6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LHX6Q9UPM6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.69■□□□□ 0.9
LHX6Q9UPM6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.69■□□□□ 0.9
LHX6Q9UPM6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LHX6Q9UPM6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LHX6Q9UPM6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 ECEL1P3-201ENST00000427961 737 ntBASIC20.66■□□□□ 0.9
LHX6Q9UPM6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.66■□□□□ 0.9
LHX6Q9UPM6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX6Q9UPM6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.65■□□□□ 0.9
LHX6Q9UPM6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.65■□□□□ 0.9
LHX6Q9UPM6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LHX6Q9UPM6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.65■□□□□ 0.9
LHX6Q9UPM6 SLC7A5P1-201ENST00000568957 537 ntBASIC20.65■□□□□ 0.9
LHX6Q9UPM6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
LHX6Q9UPM6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX6Q9UPM6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LHX6Q9UPM6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.64■□□□□ 0.9
LHX6Q9UPM6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.64■□□□□ 0.9
LHX6Q9UPM6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 OR2I1P-207ENST00000453522 948 ntBASIC20.64■□□□□ 0.89
LHX6Q9UPM6 AF201337.1-201ENST00000520239 748 ntBASIC20.64■□□□□ 0.89
LHX6Q9UPM6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX6Q9UPM6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 AC142381.4-202ENST00000563973 229 ntBASIC20.63■□□□□ 0.89
LHX6Q9UPM6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms