Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 LINC01529-204ENST00000636474 1715 ntBASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 AC080038.1-201ENST00000611274 1154 ntBASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.81■□□□□ 0.28
NOTCH3Q9UM47 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH3Q9UM47 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 KRT19P1-201ENST00000405746 1186 ntBASIC16.79■□□□□ 0.28
NOTCH3Q9UM47 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 CROCCP5-201ENST00000436658 830 ntBASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 OR2I1P-207ENST00000453522 948 ntBASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 AC142086.2-201ENST00000569753 217 ntBASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NOTCH3Q9UM47 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NOTCH3Q9UM47 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NOTCH3Q9UM47 AC144652.1-201ENST00000609974 1624 ntBASIC16.77■□□□□ 0.28
NOTCH3Q9UM47 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.77■□□□□ 0.28
NOTCH3Q9UM47 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NOTCH3Q9UM47 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NOTCH3Q9UM47 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
NOTCH3Q9UM47 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
NOTCH3Q9UM47 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NOTCH3Q9UM47 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NOTCH3Q9UM47 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NOTCH3Q9UM47 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NOTCH3Q9UM47 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 AC066615.1-201ENST00000640911 628 ntBASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 BX005040.4-201ENST00000637145 1518 ntBASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NOTCH3Q9UM47 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms