Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.86■□□□□ 0.93
NIPSNAP3AQ9UFN0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.86■□□□□ 0.93
NIPSNAP3AQ9UFN0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NIPSNAP3AQ9UFN0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.86■□□□□ 0.93
NIPSNAP3AQ9UFN0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPSNAP3AQ9UFN0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.86■□□□□ 0.93
NIPSNAP3AQ9UFN0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPSNAP3AQ9UFN0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPSNAP3AQ9UFN0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPSNAP3AQ9UFN0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 AC103834.1-201ENST00000520383 144 ntBASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 AC103724.3-201ENST00000564481 992 ntBASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 AC012354.3-201ENST00000623734 483 ntBASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NIPSNAP3AQ9UFN0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 FP325331.1-202ENST00000623531 1380 ntBASIC20.84■□□□□ 0.93
NIPSNAP3AQ9UFN0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 AL033527.3-201ENST00000566366 1196 ntBASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 AC137630.3-201ENST00000607245 391 ntBASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NIPSNAP3AQ9UFN0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
NIPSNAP3AQ9UFN0 LINC01960-201ENST00000563759 1884 ntBASIC20.83■□□□□ 0.92
NIPSNAP3AQ9UFN0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.83■□□□□ 0.92
NIPSNAP3AQ9UFN0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NIPSNAP3AQ9UFN0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NIPSNAP3AQ9UFN0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 AC009086.3-201ENST00000623486 1008 ntBASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPSNAP3AQ9UFN0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NIPSNAP3AQ9UFN0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
NIPSNAP3AQ9UFN0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NIPSNAP3AQ9UFN0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms