Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SPHK1Q9NYA1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.14■□□□□ 0.98
SPHK1Q9NYA1 LINC01960-201ENST00000563759 1884 ntBASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 IRS3P-201ENST00000223076 1006 ntBASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SPHK1Q9NYA1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.13■□□□□ 0.97
SPHK1Q9NYA1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 AC068587.7-201ENST00000641602 218 ntBASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SPHK1Q9NYA1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 MIR935-201ENST00000401179 91 ntBASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.11■□□□□ 0.97
SPHK1Q9NYA1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPHK1Q9NYA1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.1■□□□□ 0.97
SPHK1Q9NYA1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPHK1Q9NYA1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPHK1Q9NYA1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPHK1Q9NYA1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPHK1Q9NYA1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.09■□□□□ 0.97
SPHK1Q9NYA1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.09■□□□□ 0.97
SPHK1Q9NYA1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SPHK1Q9NYA1 MIR572-201ENST00000384983 95 ntBASIC21.09■□□□□ 0.97
SPHK1Q9NYA1 AC010141.3-201ENST00000456659 717 ntBASIC21.09■□□□□ 0.97
SPHK1Q9NYA1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.09■□□□□ 0.97
SPHK1Q9NYA1 C1orf229-201ENST00000623686 2258 ntBASIC21.08■□□□□ 0.97
SPHK1Q9NYA1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SPHK1Q9NYA1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.08■□□□□ 0.97
SPHK1Q9NYA1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPHK1Q9NYA1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SPHK1Q9NYA1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SPHK1Q9NYA1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPHK1Q9NYA1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.08■□□□□ 0.96
SPHK1Q9NYA1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPHK1Q9NYA1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 AC087742.1-201ENST00000575880 1738 ntBASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPHK1Q9NYA1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms