Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
THUMPD1Q9NXG2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 AC080038.3-201ENST00000623346 1952 ntBASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 C17orf82-201ENST00000623772 1530 ntBASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
THUMPD1Q9NXG2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 LINC01960-201ENST00000563759 1884 ntBASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 RARRES2P1-201ENST00000474487 481 ntBASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
THUMPD1Q9NXG2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.53■□□□□ 0.88
THUMPD1Q9NXG2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 AC009299.2-201ENST00000482477 511 ntBASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
THUMPD1Q9NXG2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
THUMPD1Q9NXG2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.51■□□□□ 0.87
THUMPD1Q9NXG2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.51■□□□□ 0.87
THUMPD1Q9NXG2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.51■□□□□ 0.87
THUMPD1Q9NXG2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THUMPD1Q9NXG2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
THUMPD1Q9NXG2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THUMPD1Q9NXG2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 FBXW4P1-201ENST00000426721 2239 ntBASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 TSPY9P-201ENST00000440215 945 ntBASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 TSPY11P-201ENST00000442607 1045 ntBASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 MIR6724-1-201ENST00000616420 92 ntBASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 MIR6724-2-201ENST00000616483 92 ntBASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 MIR6724-4-201ENST00000617390 92 ntBASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 MIR6724-3-201ENST00000622482 92 ntBASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THUMPD1Q9NXG2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms