Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 BX005040.4-201ENST00000637145 1518 ntBASIC25.12■■□□□ 1.61
RNF146Q9NTX7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF146Q9NTX7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 AC004911.1-201ENST00000416316 871 ntBASIC25.11■■□□□ 1.61
RNF146Q9NTX7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 KRT18P61-201ENST00000585825 1298 ntBASIC25.11■■□□□ 1.61
RNF146Q9NTX7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.11■■□□□ 1.61
RNF146Q9NTX7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF146Q9NTX7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF146Q9NTX7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.1■■□□□ 1.61
RNF146Q9NTX7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF146Q9NTX7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF146Q9NTX7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.1■■□□□ 1.61
RNF146Q9NTX7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.1■■□□□ 1.61
RNF146Q9NTX7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF146Q9NTX7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.1■■□□□ 1.61
RNF146Q9NTX7 OXCT2P1-201ENST00000447263 1535 ntBASIC25.1■■□□□ 1.61
RNF146Q9NTX7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF146Q9NTX7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF146Q9NTX7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.08■■□□□ 1.61
RNF146Q9NTX7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF146Q9NTX7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF146Q9NTX7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF146Q9NTX7 AC092068.2-201ENST00000590491 1708 ntBASIC25.08■■□□□ 1.61
RNF146Q9NTX7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF146Q9NTX7 DUSP8P3-201ENST00000399571 1760 ntBASIC25.08■■□□□ 1.6
RNF146Q9NTX7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.07■■□□□ 1.6
RNF146Q9NTX7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
RNF146Q9NTX7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.07■■□□□ 1.6
RNF146Q9NTX7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RNF146Q9NTX7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.07■■□□□ 1.6
RNF146Q9NTX7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF146Q9NTX7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF146Q9NTX7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.07■■□□□ 1.6
RNF146Q9NTX7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF146Q9NTX7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.05■■□□□ 1.6
RNF146Q9NTX7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.05■■□□□ 1.6
RNF146Q9NTX7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF146Q9NTX7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF146Q9NTX7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
RNF146Q9NTX7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.05■■□□□ 1.6
RNF146Q9NTX7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF146Q9NTX7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
RNF146Q9NTX7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF146Q9NTX7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.03■■□□□ 1.6
RNF146Q9NTX7 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms