Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC52A3Q9NQ40 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A3Q9NQ40 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC52A3Q9NQ40 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A3Q9NQ40 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC52A3Q9NQ40 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A3Q9NQ40 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A3Q9NQ40 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A3Q9NQ40 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A3Q9NQ40 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC52A3Q9NQ40 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC52A3Q9NQ40 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC52A3Q9NQ40 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.83■□□□□ 0.92
SLC52A3Q9NQ40 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC52A3Q9NQ40 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC52A3Q9NQ40 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC52A3Q9NQ40 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 AC005229.4-201ENST00000610085 2198 ntBASIC20.82■□□□□ 0.92
SLC52A3Q9NQ40 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 AC244015.2-201ENST00000616358 1861 ntBASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 KRT8P33-201ENST00000508125 1423 ntBASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 AL033527.3-201ENST00000566366 1196 ntBASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 AC004687.1-201ENST00000579003 1625 ntBASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A3Q9NQ40 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 AC009102.2-201ENST00000606772 1639 ntBASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 AC012354.3-201ENST00000623734 483 ntBASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC52A3Q9NQ40 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC52A3Q9NQ40 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC52A3Q9NQ40 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC52A3Q9NQ40 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC52A3Q9NQ40 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC52A3Q9NQ40 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 YBX1P4-201ENST00000392794 808 ntBASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC52A3Q9NQ40 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 AL031848.2-201ENST00000607670 837 ntBASIC20.77■□□□□ 0.92
SLC52A3Q9NQ40 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC52A3Q9NQ40 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SLC52A3Q9NQ40 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms