Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 MIR6724-4-201ENST00000617390 92 ntBASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 MIR6724-3-201ENST00000622482 92 ntBASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 UNC93B8-201ENST00000511903 705 ntBASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NRIP3Q9NQ35 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.7■□□□□ 0.74
NRIP3Q9NQ35 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NRIP3Q9NQ35 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.7■□□□□ 0.74
NRIP3Q9NQ35 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NRIP3Q9NQ35 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.7■□□□□ 0.74
NRIP3Q9NQ35 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 AL499627.2-201ENST00000606283 725 ntBASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.69■□□□□ 0.74
NRIP3Q9NQ35 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NRIP3Q9NQ35 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 CA15P2-201ENST00000611168 834 ntBASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.67■□□□□ 0.74
NRIP3Q9NQ35 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 AL117332.1-201ENST00000622628 974 ntBASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 AC007375.3-201ENST00000600936 2314 ntBASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NRIP3Q9NQ35 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NRIP3Q9NQ35 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.65■□□□□ 0.74
NRIP3Q9NQ35 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NRIP3Q9NQ35 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NRIP3Q9NQ35 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.65■□□□□ 0.74
NRIP3Q9NQ35 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NRIP3Q9NQ35 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.65■□□□□ 0.74
NRIP3Q9NQ35 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NRIP3Q9NQ35 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms