Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCM1Q9NP62 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.65■□□□□ 0.58
GCM1Q9NP62 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.65■□□□□ 0.58
GCM1Q9NP62 BX842568.3-201ENST00000418104 571 ntBASIC18.65■□□□□ 0.58
GCM1Q9NP62 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GCM1Q9NP62 OR2I1P-207ENST00000453522 948 ntBASIC18.65■□□□□ 0.58
GCM1Q9NP62 AC142381.2-201ENST00000566120 298 ntBASIC18.65■□□□□ 0.58
GCM1Q9NP62 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCM1Q9NP62 AC008764.7-201ENST00000593779 1081 ntBASIC18.65■□□□□ 0.58
GCM1Q9NP62 AC233992.3-201ENST00000607491 485 ntBASIC18.65■□□□□ 0.58
GCM1Q9NP62 AL136967.2-201ENST00000623968 743 ntBASIC18.65■□□□□ 0.58
GCM1Q9NP62 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCM1Q9NP62 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCM1Q9NP62 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
GCM1Q9NP62 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GCM1Q9NP62 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GCM1Q9NP62 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.64■□□□□ 0.57
GCM1Q9NP62 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCM1Q9NP62 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCM1Q9NP62 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCM1Q9NP62 MIR939-201ENST00000401314 82 ntBASIC18.64■□□□□ 0.57
GCM1Q9NP62 SLC47A1P1-202ENST00000449666 945 ntBASIC18.64■□□□□ 0.57
GCM1Q9NP62 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GCM1Q9NP62 AC027682.1-201ENST00000562846 899 ntBASIC18.64■□□□□ 0.57
GCM1Q9NP62 AF213884.3-201ENST00000563833 479 ntBASIC18.64■□□□□ 0.57
GCM1Q9NP62 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCM1Q9NP62 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GCM1Q9NP62 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCM1Q9NP62 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCM1Q9NP62 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCM1Q9NP62 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCM1Q9NP62 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCM1Q9NP62 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.63■□□□□ 0.57
GCM1Q9NP62 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCM1Q9NP62 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GCM1Q9NP62 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCM1Q9NP62 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GCM1Q9NP62 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCM1Q9NP62 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GCM1Q9NP62 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.63■□□□□ 0.57
GCM1Q9NP62 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCM1Q9NP62 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCM1Q9NP62 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.63■□□□□ 0.57
GCM1Q9NP62 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GCM1Q9NP62 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCM1Q9NP62 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.63■□□□□ 0.57
GCM1Q9NP62 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
GCM1Q9NP62 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.63■□□□□ 0.57
GCM1Q9NP62 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.62■□□□□ 0.57
GCM1Q9NP62 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCM1Q9NP62 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.62■□□□□ 0.57
GCM1Q9NP62 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GCM1Q9NP62 AC091305.1-201ENST00000479476 895 ntBASIC18.62■□□□□ 0.57
GCM1Q9NP62 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GCM1Q9NP62 AC010525.1-201ENST00000585559 441 ntBASIC18.62■□□□□ 0.57
GCM1Q9NP62 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.62■□□□□ 0.57
GCM1Q9NP62 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.62■□□□□ 0.57
GCM1Q9NP62 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GCM1Q9NP62 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCM1Q9NP62 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCM1Q9NP62 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCM1Q9NP62 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GCM1Q9NP62 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCM1Q9NP62 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GCM1Q9NP62 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCM1Q9NP62 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GCM1Q9NP62 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
GCM1Q9NP62 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCM1Q9NP62 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCM1Q9NP62 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.61■□□□□ 0.57
GCM1Q9NP62 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCM1Q9NP62 AC099791.1-201ENST00000416440 715 ntBASIC18.61■□□□□ 0.57
GCM1Q9NP62 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.61■□□□□ 0.57
GCM1Q9NP62 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.61■□□□□ 0.57
GCM1Q9NP62 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GCM1Q9NP62 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCM1Q9NP62 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCM1Q9NP62 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.61■□□□□ 0.57
GCM1Q9NP62 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GCM1Q9NP62 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GCM1Q9NP62 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GCM1Q9NP62 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 RASA4CP-201ENST00000424092 1398 ntBASIC18.6■□□□□ 0.57
GCM1Q9NP62 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCM1Q9NP62 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCM1Q9NP62 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCM1Q9NP62 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GCM1Q9NP62 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GCM1Q9NP62 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCM1Q9NP62 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.6■□□□□ 0.57
GCM1Q9NP62 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GCM1Q9NP62 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms