Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
ZFYVE28Q9HCC9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ZFYVE28Q9HCC9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
ZFYVE28Q9HCC9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.34■■□□□ 1.65
ZFYVE28Q9HCC9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.34■■□□□ 1.65
ZFYVE28Q9HCC9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.34■■□□□ 1.65
ZFYVE28Q9HCC9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ZFYVE28Q9HCC9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.34■■□□□ 1.65
ZFYVE28Q9HCC9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 AC004687.1-201ENST00000579003 1625 ntBASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
ZFYVE28Q9HCC9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
ZFYVE28Q9HCC9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZFYVE28Q9HCC9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.32■■□□□ 1.64
ZFYVE28Q9HCC9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
ZFYVE28Q9HCC9 AC104187.1-201ENST00000607510 612 ntBASIC25.32■■□□□ 1.64
ZFYVE28Q9HCC9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 AC069152.1-201ENST00000438030 544 ntBASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 AC093827.2-201ENST00000512654 315 ntBASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 AC133041.1-202ENST00000642053 222 ntBASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZFYVE28Q9HCC9 AP003733.4-201ENST00000623785 1697 ntBASIC25.3■■□□□ 1.64
ZFYVE28Q9HCC9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.3■■□□□ 1.64
ZFYVE28Q9HCC9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZFYVE28Q9HCC9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.3■■□□□ 1.64
ZFYVE28Q9HCC9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZFYVE28Q9HCC9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.3■■□□□ 1.64
ZFYVE28Q9HCC9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.3■■□□□ 1.64
ZFYVE28Q9HCC9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 DET1-205ENST00000558413 583 ntTSL 4 BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZFYVE28Q9HCC9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 KRT87P-202ENST00000534226 1464 ntBASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 OXCT2P1-201ENST00000447263 1535 ntBASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZFYVE28Q9HCC9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 UBE2DNL-204ENST00000602536 740 ntBASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.27■■□□□ 1.64
ZFYVE28Q9HCC9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 AC073210.2-201ENST00000430369 194 ntBASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZFYVE28Q9HCC9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZFYVE28Q9HCC9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZFYVE28Q9HCC9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZFYVE28Q9HCC9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZFYVE28Q9HCC9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.25■■□□□ 1.63
ZFYVE28Q9HCC9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.25■■□□□ 1.63
ZFYVE28Q9HCC9 AC008687.6-201ENST00000596318 630 ntBASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms