Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HES4Q9HCC6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HES4Q9HCC6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HES4Q9HCC6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HES4Q9HCC6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HES4Q9HCC6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HES4Q9HCC6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
HES4Q9HCC6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
HES4Q9HCC6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HES4Q9HCC6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.49■□□□□ 0.55
HES4Q9HCC6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
HES4Q9HCC6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.49■□□□□ 0.55
HES4Q9HCC6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HES4Q9HCC6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HES4Q9HCC6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HES4Q9HCC6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HES4Q9HCC6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HES4Q9HCC6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HES4Q9HCC6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.48■□□□□ 0.55
HES4Q9HCC6 DUX4L19-201ENST00000557448 1267 ntBASIC18.48■□□□□ 0.55
HES4Q9HCC6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
HES4Q9HCC6 AL138724.1-201ENST00000606771 1088 ntBASIC18.48■□□□□ 0.55
HES4Q9HCC6 CA15P2-201ENST00000611168 834 ntBASIC18.48■□□□□ 0.55
HES4Q9HCC6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 LINC00526-201ENST00000581067 1875 ntBASIC18.47■□□□□ 0.55
HES4Q9HCC6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
HES4Q9HCC6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HES4Q9HCC6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.46■□□□□ 0.55
HES4Q9HCC6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.46■□□□□ 0.55
HES4Q9HCC6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.46■□□□□ 0.55
HES4Q9HCC6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HES4Q9HCC6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.46■□□□□ 0.55
HES4Q9HCC6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HES4Q9HCC6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HES4Q9HCC6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HES4Q9HCC6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
HES4Q9HCC6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 AC139530.1-201ENST00000575312 1977 ntBASIC18.45■□□□□ 0.54
HES4Q9HCC6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 AC080038.3-201ENST00000623346 1952 ntBASIC18.45■□□□□ 0.54
HES4Q9HCC6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.45■□□□□ 0.54
HES4Q9HCC6 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.45■□□□□ 0.54
HES4Q9HCC6 OR2I1P-207ENST00000453522 948 ntBASIC18.45■□□□□ 0.54
HES4Q9HCC6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.45■□□□□ 0.54
HES4Q9HCC6 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.45■□□□□ 0.54
HES4Q9HCC6 AL031602.1-201ENST00000633169 911 ntBASIC18.45■□□□□ 0.54
HES4Q9HCC6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HES4Q9HCC6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.45■□□□□ 0.54
HES4Q9HCC6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
HES4Q9HCC6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HES4Q9HCC6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HES4Q9HCC6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms