Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1BQ9H9Y6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 IGHV3-19-201ENST00000521488 291 ntBASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 AL161729.1-201ENST00000604104 1402 ntBASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.51■■□□□ 1.03
POLR1BQ9H9Y6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 MIR572-201ENST00000384983 95 ntBASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 AC004911.1-201ENST00000416316 871 ntBASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR1BQ9H9Y6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 AL354811.1-201ENST00000610286 706 ntBASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR1BQ9H9Y6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 AC012414.1-201ENST00000556676 535 ntBASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR1BQ9H9Y6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR1BQ9H9Y6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.47■■□□□ 1.03
POLR1BQ9H9Y6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
POLR1BQ9H9Y6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR1BQ9H9Y6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR1BQ9H9Y6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.47■■□□□ 1.03
POLR1BQ9H9Y6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
POLR1BQ9H9Y6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms