Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDH23Q9H251 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.6■■□□□ 1.37
CDH23Q9H251 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.6■■□□□ 1.37
CDH23Q9H251 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.6■■□□□ 1.37
CDH23Q9H251 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.6■■□□□ 1.37
CDH23Q9H251 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH23Q9H251 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.6■■□□□ 1.37
CDH23Q9H251 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH23Q9H251 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.6■■□□□ 1.37
CDH23Q9H251 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDH23Q9H251 KRT87P-202ENST00000534226 1464 ntBASIC23.6■■□□□ 1.37
CDH23Q9H251 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH23Q9H251 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDH23Q9H251 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.59■■□□□ 1.37
CDH23Q9H251 AL121749.1-202ENST00000609313 2153 ntBASIC23.59■■□□□ 1.37
CDH23Q9H251 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.59■■□□□ 1.37
CDH23Q9H251 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDH23Q9H251 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.59■■□□□ 1.37
CDH23Q9H251 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.59■■□□□ 1.37
CDH23Q9H251 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDH23Q9H251 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDH23Q9H251 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDH23Q9H251 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.58■■□□□ 1.37
CDH23Q9H251 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.58■■□□□ 1.37
CDH23Q9H251 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDH23Q9H251 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.58■■□□□ 1.37
CDH23Q9H251 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.58■■□□□ 1.37
CDH23Q9H251 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CDH23Q9H251 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.58■■□□□ 1.37
CDH23Q9H251 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDH23Q9H251 AC142086.6-201ENST00000621154 1765 ntBASIC23.58■■□□□ 1.37
CDH23Q9H251 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDH23Q9H251 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDH23Q9H251 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.58■■□□□ 1.36
CDH23Q9H251 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.58■■□□□ 1.36
CDH23Q9H251 AF201337.1-201ENST00000520239 748 ntBASIC23.57■■□□□ 1.36
CDH23Q9H251 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.57■■□□□ 1.36
CDH23Q9H251 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
CDH23Q9H251 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CDH23Q9H251 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
CDH23Q9H251 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDH23Q9H251 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
CDH23Q9H251 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDH23Q9H251 RNA5SP413-201ENST00000516373 109 ntBASIC23.57■■□□□ 1.36
CDH23Q9H251 AP006294.2-201ENST00000641667 209 ntBASIC23.57■■□□□ 1.36
CDH23Q9H251 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDH23Q9H251 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDH23Q9H251 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CDH23Q9H251 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDH23Q9H251 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.56■■□□□ 1.36
CDH23Q9H251 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.56■■□□□ 1.36
CDH23Q9H251 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CDH23Q9H251 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.56■■□□□ 1.36
CDH23Q9H251 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDH23Q9H251 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDH23Q9H251 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.55■■□□□ 1.36
CDH23Q9H251 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDH23Q9H251 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDH23Q9H251 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDH23Q9H251 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDH23Q9H251 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDH23Q9H251 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
CDH23Q9H251 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.55■■□□□ 1.36
CDH23Q9H251 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.55■■□□□ 1.36
CDH23Q9H251 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDH23Q9H251 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDH23Q9H251 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.54■■□□□ 1.36
CDH23Q9H251 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.54■■□□□ 1.36
CDH23Q9H251 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDH23Q9H251 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CDH23Q9H251 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CDH23Q9H251 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.54■■□□□ 1.36
CDH23Q9H251 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.54■■□□□ 1.36
CDH23Q9H251 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.54■■□□□ 1.36
CDH23Q9H251 AC083880.1-201ENST00000608266 535 ntBASIC23.54■■□□□ 1.36
CDH23Q9H251 AC133041.1-202ENST00000642053 222 ntBASIC23.54■■□□□ 1.36
CDH23Q9H251 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDH23Q9H251 AC144652.1-201ENST00000609974 1624 ntBASIC23.54■■□□□ 1.36
CDH23Q9H251 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDH23Q9H251 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.54■■□□□ 1.36
CDH23Q9H251 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.53■■□□□ 1.36
CDH23Q9H251 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.53■■□□□ 1.36
CDH23Q9H251 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDH23Q9H251 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDH23Q9H251 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDH23Q9H251 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.53■■□□□ 1.36
CDH23Q9H251 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.53■■□□□ 1.36
CDH23Q9H251 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDH23Q9H251 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDH23Q9H251 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.53■■□□□ 1.36
CDH23Q9H251 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.53■■□□□ 1.36
CDH23Q9H251 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDH23Q9H251 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDH23Q9H251 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDH23Q9H251 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CDH23Q9H251 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.52■■□□□ 1.36
CDH23Q9H251 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.52■■□□□ 1.36
CDH23Q9H251 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.52■■□□□ 1.36
CDH23Q9H251 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDH23Q9H251 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms