Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 AL117332.1-201ENST00000622628 974 ntBASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NUCKS1Q9H1E3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NUCKS1Q9H1E3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NUCKS1Q9H1E3 AC009102.2-201ENST00000606772 1639 ntBASIC23.71■■□□□ 1.39
NUCKS1Q9H1E3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
NUCKS1Q9H1E3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NUCKS1Q9H1E3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.71■■□□□ 1.39
NUCKS1Q9H1E3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NUCKS1Q9H1E3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.71■■□□□ 1.39
NUCKS1Q9H1E3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
NUCKS1Q9H1E3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.71■■□□□ 1.39
NUCKS1Q9H1E3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NUCKS1Q9H1E3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.7■■□□□ 1.39
NUCKS1Q9H1E3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.7■■□□□ 1.39
NUCKS1Q9H1E3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NUCKS1Q9H1E3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.7■■□□□ 1.39
NUCKS1Q9H1E3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NUCKS1Q9H1E3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NUCKS1Q9H1E3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 MIR3621-201ENST00000580529 85 ntBASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NUCKS1Q9H1E3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NUCKS1Q9H1E3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms