Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3Q9BZ76 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.98■□□□□ 0.95
CNTNAP3Q9BZ76 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 UNC93B5-201ENST00000530315 699 ntBASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 FP325331.1-202ENST00000623531 1380 ntBASIC20.97■□□□□ 0.95
CNTNAP3Q9BZ76 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 MIR718-201ENST00000390190 70 ntBASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 MIPEPP3-201ENST00000412105 444 ntBASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 UBE2SP1-201ENST00000450587 669 ntBASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTNAP3Q9BZ76 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3Q9BZ76 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.95■□□□□ 0.94
CNTNAP3Q9BZ76 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3Q9BZ76 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3Q9BZ76 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3Q9BZ76 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CNTNAP3Q9BZ76 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3Q9BZ76 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3Q9BZ76 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 BX005040.4-201ENST00000637145 1518 ntBASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP3Q9BZ76 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3Q9BZ76 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3Q9BZ76 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP3Q9BZ76 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP3Q9BZ76 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP3Q9BZ76 AC079140.4-201ENST00000507448 529 ntBASIC20.91■□□□□ 0.94
CNTNAP3Q9BZ76 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTNAP3Q9BZ76 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTNAP3Q9BZ76 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP3Q9BZ76 UBE2DNL-204ENST00000602536 740 ntBASIC20.91■□□□□ 0.94
CNTNAP3Q9BZ76 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP3Q9BZ76 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms