Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LITAFQ99732 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.62□□□□□ -0.07
LITAFQ99732 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 AL391422.3-201ENST00000603791 2761 ntBASIC14.62□□□□□ -0.07
LITAFQ99732 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LITAFQ99732 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LITAFQ99732 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC14.61□□□□□ -0.07
LITAFQ99732 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
LITAFQ99732 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LITAFQ99732 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LITAFQ99732 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LITAFQ99732 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LITAFQ99732 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LITAFQ99732 GFER-205ENST00000569451 517 ntTSL 5 BASIC14.61□□□□□ -0.07
LITAFQ99732 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LITAFQ99732 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LITAFQ99732 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LITAFQ99732 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LITAFQ99732 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LITAFQ99732 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LITAFQ99732 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LITAFQ99732 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.61□□□□□ -0.07
LITAFQ99732 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LITAFQ99732 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.61□□□□□ -0.07
LITAFQ99732 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LITAFQ99732 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.6□□□□□ -0.07
LITAFQ99732 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LITAFQ99732 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LITAFQ99732 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.6□□□□□ -0.07
LITAFQ99732 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LITAFQ99732 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.6□□□□□ -0.07
LITAFQ99732 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.59□□□□□ -0.07
LITAFQ99732 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LITAFQ99732 AC144652.1-201ENST00000609974 1624 ntBASIC14.59□□□□□ -0.07
LITAFQ99732 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.59□□□□□ -0.07
LITAFQ99732 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.59□□□□□ -0.07
LITAFQ99732 AC007029.1-201ENST00000604183 313 ntBASIC14.59□□□□□ -0.07
LITAFQ99732 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.59□□□□□ -0.07
LITAFQ99732 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.59□□□□□ -0.07
LITAFQ99732 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LITAFQ99732 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.59□□□□□ -0.07
LITAFQ99732 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LITAFQ99732 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LITAFQ99732 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.58□□□□□ -0.07
LITAFQ99732 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
LITAFQ99732 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LITAFQ99732 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC14.58□□□□□ -0.08
LITAFQ99732 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LITAFQ99732 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.58□□□□□ -0.08
LITAFQ99732 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LITAFQ99732 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LITAFQ99732 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LITAFQ99732 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LITAFQ99732 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LITAFQ99732 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LITAFQ99732 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LITAFQ99732 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LITAFQ99732 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LITAFQ99732 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LITAFQ99732 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.57□□□□□ -0.08
LITAFQ99732 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.57□□□□□ -0.08
LITAFQ99732 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LITAFQ99732 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.57□□□□□ -0.08
LITAFQ99732 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.57□□□□□ -0.08
LITAFQ99732 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LITAFQ99732 METRNL-202ENST00000570778 967 ntTSL 5 BASIC14.57□□□□□ -0.08
LITAFQ99732 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LITAFQ99732 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LITAFQ99732 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LITAFQ99732 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.57□□□□□ -0.08
LITAFQ99732 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LITAFQ99732 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
LITAFQ99732 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LITAFQ99732 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LITAFQ99732 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.57□□□□□ -0.08
LITAFQ99732 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 FEM1AP1-201ENST00000431297 1995 ntBASIC14.56□□□□□ -0.08
LITAFQ99732 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.56□□□□□ -0.08
LITAFQ99732 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
LITAFQ99732 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC14.56□□□□□ -0.08
LITAFQ99732 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LITAFQ99732 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms