Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.33■□□□□ 0.52
CCL13Q99616 AF213884.3-201ENST00000563833 479 ntBASIC18.33■□□□□ 0.52
CCL13Q99616 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.33■□□□□ 0.52
CCL13Q99616 AL031432.3-201ENST00000607698 485 ntBASIC18.33■□□□□ 0.52
CCL13Q99616 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL13Q99616 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL13Q99616 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL13Q99616 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL13Q99616 AC099791.1-201ENST00000416440 715 ntBASIC18.32■□□□□ 0.52
CCL13Q99616 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL13Q99616 AP001330.3-201ENST00000520123 633 ntBASIC18.32■□□□□ 0.52
CCL13Q99616 AC142381.2-201ENST00000566120 298 ntBASIC18.32■□□□□ 0.52
CCL13Q99616 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCL13Q99616 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCL13Q99616 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCL13Q99616 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL13Q99616 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL13Q99616 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL13Q99616 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL13Q99616 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.32■□□□□ 0.52
CCL13Q99616 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL13Q99616 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL13Q99616 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL13Q99616 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCL13Q99616 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL13Q99616 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL13Q99616 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.31■□□□□ 0.52
CCL13Q99616 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCL13Q99616 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL13Q99616 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.31■□□□□ 0.52
CCL13Q99616 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL13Q99616 AC126544.1-201ENST00000580842 1059 ntBASIC18.31■□□□□ 0.52
CCL13Q99616 AL136967.2-201ENST00000623968 743 ntBASIC18.31■□□□□ 0.52
CCL13Q99616 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL13Q99616 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL13Q99616 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL13Q99616 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL13Q99616 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL13Q99616 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL13Q99616 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCL13Q99616 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL13Q99616 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL13Q99616 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCL13Q99616 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.3■□□□□ 0.52
CCL13Q99616 MIR939-201ENST00000401314 82 ntBASIC18.3■□□□□ 0.52
CCL13Q99616 SUDS3P1-201ENST00000505831 966 ntBASIC18.3■□□□□ 0.52
CCL13Q99616 AC027682.1-201ENST00000562846 899 ntBASIC18.3■□□□□ 0.52
CCL13Q99616 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CCL13Q99616 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL13Q99616 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL13Q99616 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL13Q99616 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL13Q99616 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL13Q99616 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL13Q99616 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL13Q99616 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCL13Q99616 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL13Q99616 AC133561.1-201ENST00000568600 2415 ntBASIC18.28■□□□□ 0.52
CCL13Q99616 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCL13Q99616 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL13Q99616 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL13Q99616 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL13Q99616 AL031602.1-201ENST00000633169 911 ntBASIC18.28■□□□□ 0.52
CCL13Q99616 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL13Q99616 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL13Q99616 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL13Q99616 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCL13Q99616 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL13Q99616 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL13Q99616 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL13Q99616 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCL13Q99616 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCL13Q99616 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL13Q99616 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCL13Q99616 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCL13Q99616 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL13Q99616 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL13Q99616 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL13Q99616 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL13Q99616 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms