Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 snR37snR37 386 nt3.04□□□□□ -1.92
ATG40Q99325 SIR2YDL042C 1689 nt3.04□□□□□ -1.92
ATG40Q99325 RRN6YBL014C 2685 nt3.04□□□□□ -1.92
ATG40Q99325 DHH1YDL160C 1521 nt3.03□□□□□ -1.92
ATG40Q99325 WHI4YDL224C 1950 nt3.03□□□□□ -1.92
ATG40Q99325 RNT1YMR239C 1416 nt3.03□□□□□ -1.92
ATG40Q99325 NUS1YDL193W 1128 nt3.03□□□□□ -1.92
ATG40Q99325 MCM1YMR043W 861 nt3.03□□□□□ -1.92
ATG40Q99325 RRP36YOR287C 903 nt3.03□□□□□ -1.92
ATG40Q99325 FRM2YCL026C-A 582 nt3.03□□□□□ -1.92
ATG40Q99325 RRP5YMR229C 5190 nt3.03□□□□□ -1.93
ATG40Q99325 FKH1YIL131C 1455 nt3.03□□□□□ -1.93
ATG40Q99325 STT4YLR305C 5703 nt3.02□□□□□ -1.93
ATG40Q99325 SEG1YMR086W 2883 nt3.02□□□□□ -1.93
ATG40Q99325 IMG2YCR071C 441 nt3.02□□□□□ -1.93
ATG40Q99325 AAD3YCR107W 1092 nt3.02□□□□□ -1.93
ATG40Q99325 SPO12YHR152W 522 nt3.02□□□□□ -1.93
ATG40Q99325 IRC25YLR021W 540 nt3.02□□□□□ -1.93
ATG40Q99325 RIM11YMR139W 1113 nt3.02□□□□□ -1.93
ATG40Q99325 CWC25YNL245C 540 nt3.02□□□□□ -1.93
ATG40Q99325 ASI1YMR119W 1875 nt3.02□□□□□ -1.93
ATG40Q99325 COP1YDL145C 3606 nt3.02□□□□□ -1.93
ATG40Q99325 ARX1YDR101C 1782 nt3.02□□□□□ -1.93
ATG40Q99325 AIM21YIR003W 2040 nt3.02□□□□□ -1.93
ATG40Q99325 GZF3YJL110C 1656 nt3.01□□□□□ -1.93
ATG40Q99325 FMP10YER182W 735 nt3.01□□□□□ -1.93
ATG40Q99325 YFL065CYFL065C 309 nt3.01□□□□□ -1.93
ATG40Q99325 YGL132WYGL132W 336 nt3.01□□□□□ -1.93
ATG40Q99325 SOD1YJR104C 465 nt3.01□□□□□ -1.93
ATG40Q99325 TPP1YMR156C 717 nt3.01□□□□□ -1.93
ATG40Q99325 MOH1YBL049W 417 nt3.01□□□□□ -1.93
ATG40Q99325 CTR1YPR124W 1221 nt3.01□□□□□ -1.93
ATG40Q99325 SRS2YJL092W 3525 nt3.01□□□□□ -1.93
ATG40Q99325 PHO12YHR215W 1404 nt3.01□□□□□ -1.93
ATG40Q99325 TED1YIL039W 1422 nt3.01□□□□□ -1.93
ATG40Q99325 PHO11YAR071W 1404 nt3.01□□□□□ -1.93
ATG40Q99325 YJR030CYJR030C 2238 nt3□□□□□ -1.93
ATG40Q99325 YCR050CYCR050C 309 nt3□□□□□ -1.93
ATG40Q99325 YGR079WYGR079W 1113 nt3□□□□□ -1.93
ATG40Q99325 FOL2YGR267C 732 nt3□□□□□ -1.93
ATG40Q99325 MRPL24YMR193W 777 nt3□□□□□ -1.93
ATG40Q99325 TIR2YOR010C 756 nt3□□□□□ -1.93
ATG40Q99325 HEF3YNL014W 3135 nt3□□□□□ -1.93
ATG40Q99325 RNA14YMR061W 2034 nt3□□□□□ -1.93
ATG40Q99325 TAF6YGL112C 1551 nt3□□□□□ -1.93
ATG40Q99325 RAD54YGL163C 2697 nt2.99□□□□□ -1.93
ATG40Q99325 SOF1YLL011W 1470 nt2.99□□□□□ -1.93
ATG40Q99325 YDL071CYDL071C 375 nt2.99□□□□□ -1.93
ATG40Q99325 YEL028WYEL028W 462 nt2.99□□□□□ -1.93
ATG40Q99325 YGL193CYGL193C 312 nt2.99□□□□□ -1.93
ATG40Q99325 TOM20YGR082W 552 nt2.99□□□□□ -1.93
ATG40Q99325 AIM22YJL046W 1230 nt2.99□□□□□ -1.93
ATG40Q99325 RSF1YMR030W 1131 nt2.99□□□□□ -1.93
ATG40Q99325 SNO1YMR095C 675 nt2.99□□□□□ -1.93
ATG40Q99325 YPR108W-AYPR108W-A 213 nt2.99□□□□□ -1.93
ATG40Q99325 UGA3YDL170W 1587 nt2.99□□□□□ -1.93
ATG40Q99325 HPR1YDR138W 2259 nt2.99□□□□□ -1.93
ATG40Q99325 ATG32YIL146C 1590 nt2.99□□□□□ -1.93
ATG40Q99325 YLR352WYLR352W 2424 nt2.99□□□□□ -1.93
ATG40Q99325 SYF1YDR416W 2580 nt2.99□□□□□ -1.93
ATG40Q99325 YRM1YOR172W 2361 nt2.98□□□□□ -1.93
ATG40Q99325 SMC3YJL074C 3693 nt2.98□□□□□ -1.93
ATG40Q99325 BUD5YCR038C 1929 nt2.98□□□□□ -1.93
ATG40Q99325 RPS8BYER102W 603 nt2.98□□□□□ -1.93
ATG40Q99325 UPS2YLR168C 693 nt2.98□□□□□ -1.93
ATG40Q99325 RNA1YMR235C 1224 nt2.98□□□□□ -1.93
ATG40Q99325 RPS8AYBL072C 603 nt2.98□□□□□ -1.93
ATG40Q99325 YOL079WYOL079W 399 nt2.98□□□□□ -1.93
ATG40Q99325 YAR1YPL239W 603 nt2.98□□□□□ -1.93
ATG40Q99325 SPO77YLR341W 1434 nt2.98□□□□□ -1.93
ATG40Q99325 BMS1YPL217C 3552 nt2.98□□□□□ -1.93
ATG40Q99325 RTS1YOR014W 2274 nt2.98□□□□□ -1.93
ATG40Q99325 STV1YMR054W 2673 nt2.97□□□□□ -1.93
ATG40Q99325 PCL10YGL134W 1302 nt2.97□□□□□ -1.93
ATG40Q99325 RTT109YLL002W 1311 nt2.97□□□□□ -1.93
ATG40Q99325 GCD1YOR260W 1737 nt2.97□□□□□ -1.93
ATG40Q99325 RPA14YDR156W 414 nt2.97□□□□□ -1.93
ATG40Q99325 FCF1YDR339C 570 nt2.97□□□□□ -1.93
ATG40Q99325 VPS71YML041C 843 nt2.97□□□□□ -1.93
ATG40Q99325 YPL162CYPL162C 822 nt2.97□□□□□ -1.93
ATG40Q99325 RPS9BYBR189W 588 nt2.97□□□□□ -1.93
ATG40Q99325 GAS2YLR343W 1668 nt2.97□□□□□ -1.93
ATG40Q99325 CDC9YDL164C 2268 nt2.96□□□□□ -1.93
ATG40Q99325 BCH2YKR027W 2298 nt2.96□□□□□ -1.93
ATG40Q99325 PSY4YBL046W 1326 nt2.96□□□□□ -1.93
ATG40Q99325 MUM3YOR298W 1440 nt2.96□□□□□ -1.94
ATG40Q99325 OTU1YFL044C 906 nt2.96□□□□□ -1.94
ATG40Q99325 YFR045WYFR045W 930 nt2.96□□□□□ -1.94
ATG40Q99325 YHB1YGR234W 1200 nt2.96□□□□□ -1.94
ATG40Q99325 SGN1YIR001C 753 nt2.96□□□□□ -1.94
ATG40Q99325 SPC34YKR037C 888 nt2.96□□□□□ -1.94
ATG40Q99325 MMM1YLL006W 1281 nt2.96□□□□□ -1.94
ATG40Q99325 RPS31YLR167W 459 nt2.96□□□□□ -1.94
ATG40Q99325 VTA1YLR181C 993 nt2.96□□□□□ -1.94
ATG40Q99325 SHH3YMR118C 591 nt2.96□□□□□ -1.94
ATG40Q99325 YBR103C-AYBR103C-A 144 nt2.96□□□□□ -1.94
ATG40Q99325 APP1YNL094W 1764 nt2.96□□□□□ -1.94
ATG40Q99325 SLA1YBL007C 3735 nt2.96□□□□□ -1.94
ATG40Q99325 PRM2YIL037C 1971 nt2.96□□□□□ -1.94
ATG40Q99325 AUS1YOR011W 4185 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms