Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CMTM3Q96MX0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CMTM3Q96MX0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.83■□□□□ 0.61
CMTM3Q96MX0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CMTM3Q96MX0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CMTM3Q96MX0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.83■□□□□ 0.61
CMTM3Q96MX0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.83■□□□□ 0.61
CMTM3Q96MX0 FP325331.1-202ENST00000623531 1380 ntBASIC18.83■□□□□ 0.61
CMTM3Q96MX0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CMTM3Q96MX0 Z98882.1-201ENST00000622160 2253 ntBASIC18.83■□□□□ 0.61
CMTM3Q96MX0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMTM3Q96MX0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMTM3Q96MX0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMTM3Q96MX0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CMTM3Q96MX0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CMTM3Q96MX0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CMTM3Q96MX0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMTM3Q96MX0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 AL592293.1-201ENST00000502889 1188 ntBASIC18.82■□□□□ 0.6
CMTM3Q96MX0 CA15P2-201ENST00000611168 834 ntBASIC18.82■□□□□ 0.6
CMTM3Q96MX0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 LINC01529-204ENST00000636474 1715 ntBASIC18.82■□□□□ 0.6
CMTM3Q96MX0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMTM3Q96MX0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 FEM1AP4-201ENST00000443167 1987 ntBASIC18.81■□□□□ 0.6
CMTM3Q96MX0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMTM3Q96MX0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMTM3Q96MX0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CMTM3Q96MX0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.8■□□□□ 0.6
CMTM3Q96MX0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CMTM3Q96MX0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMTM3Q96MX0 GPX1-201ENST00000419349 1106 ntBASIC18.8■□□□□ 0.6
CMTM3Q96MX0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CMTM3Q96MX0 AC019171.1-201ENST00000601251 1056 ntBASIC18.8■□□□□ 0.6
CMTM3Q96MX0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMTM3Q96MX0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMTM3Q96MX0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CMTM3Q96MX0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 AC092667.1-201ENST00000434301 2586 ntBASIC18.79■□□□□ 0.6
CMTM3Q96MX0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMTM3Q96MX0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 AF131216.4-201ENST00000638924 1588 ntBASIC18.78■□□□□ 0.6
CMTM3Q96MX0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMTM3Q96MX0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms