Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPG11Q96JI7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPG11Q96JI7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPG11Q96JI7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.73■□□□□ 0.59
SPG11Q96JI7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPG11Q96JI7 AC007322.1-201ENST00000426983 750 ntBASIC18.73■□□□□ 0.59
SPG11Q96JI7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.73■□□□□ 0.59
SPG11Q96JI7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPG11Q96JI7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPG11Q96JI7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.72■□□□□ 0.59
SPG11Q96JI7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPG11Q96JI7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SPG11Q96JI7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPG11Q96JI7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPG11Q96JI7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SPG11Q96JI7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPG11Q96JI7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
SPG11Q96JI7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.72■□□□□ 0.59
SPG11Q96JI7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPG11Q96JI7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SPG11Q96JI7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPG11Q96JI7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.71■□□□□ 0.59
SPG11Q96JI7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPG11Q96JI7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPG11Q96JI7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.71■□□□□ 0.59
SPG11Q96JI7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPG11Q96JI7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.71■□□□□ 0.59
SPG11Q96JI7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SPG11Q96JI7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SPG11Q96JI7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SPG11Q96JI7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPG11Q96JI7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SPG11Q96JI7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SPG11Q96JI7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPG11Q96JI7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.7■□□□□ 0.58
SPG11Q96JI7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPG11Q96JI7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SPG11Q96JI7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
SPG11Q96JI7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SPG11Q96JI7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPG11Q96JI7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPG11Q96JI7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPG11Q96JI7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPG11Q96JI7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPG11Q96JI7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.7■□□□□ 0.58
SPG11Q96JI7 POU5F1P3-201ENST00000428824 1078 ntBASIC18.7■□□□□ 0.58
SPG11Q96JI7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.7■□□□□ 0.58
SPG11Q96JI7 AC005181.1-201ENST00000604782 1256 ntBASIC18.7■□□□□ 0.58
SPG11Q96JI7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPG11Q96JI7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPG11Q96JI7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPG11Q96JI7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPG11Q96JI7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.69■□□□□ 0.58
SPG11Q96JI7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.69■□□□□ 0.58
SPG11Q96JI7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPG11Q96JI7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPG11Q96JI7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPG11Q96JI7 FAM201B-201ENST00000458407 597 ntBASIC18.69■□□□□ 0.58
SPG11Q96JI7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.69■□□□□ 0.58
SPG11Q96JI7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.69■□□□□ 0.58
SPG11Q96JI7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.68■□□□□ 0.58
SPG11Q96JI7 DUSP8P4-201ENST00000399538 1761 ntBASIC18.68■□□□□ 0.58
SPG11Q96JI7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SPG11Q96JI7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPG11Q96JI7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPG11Q96JI7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.68■□□□□ 0.58
SPG11Q96JI7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPG11Q96JI7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPG11Q96JI7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.68■□□□□ 0.58
SPG11Q96JI7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.68■□□□□ 0.58
SPG11Q96JI7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.68■□□□□ 0.58
SPG11Q96JI7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.68■□□□□ 0.58
SPG11Q96JI7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPG11Q96JI7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.67■□□□□ 0.58
SPG11Q96JI7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPG11Q96JI7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.67■□□□□ 0.58
SPG11Q96JI7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPG11Q96JI7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SPG11Q96JI7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SPG11Q96JI7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPG11Q96JI7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SPG11Q96JI7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
SPG11Q96JI7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SPG11Q96JI7 AC004687.1-201ENST00000579003 1625 ntBASIC18.67■□□□□ 0.58
SPG11Q96JI7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.66■□□□□ 0.58
SPG11Q96JI7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.66■□□□□ 0.58
SPG11Q96JI7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPG11Q96JI7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPG11Q96JI7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.66■□□□□ 0.58
SPG11Q96JI7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPG11Q96JI7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPG11Q96JI7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.66■□□□□ 0.58
SPG11Q96JI7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.66■□□□□ 0.58
SPG11Q96JI7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.66■□□□□ 0.58
SPG11Q96JI7 UBE2DNL-204ENST00000602536 740 ntBASIC18.66■□□□□ 0.58
SPG11Q96JI7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.66■□□□□ 0.58
SPG11Q96JI7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPG11Q96JI7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPG11Q96JI7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SPG11Q96JI7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms