Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19■□□□□ 0.63
SEH1LQ96EE3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SEH1LQ96EE3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEH1LQ96EE3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEH1LQ96EE3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEH1LQ96EE3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
SEH1LQ96EE3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
SEH1LQ96EE3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEH1LQ96EE3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19■□□□□ 0.63
SEH1LQ96EE3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19■□□□□ 0.63
SEH1LQ96EE3 MIR6724-1-201ENST00000616420 92 ntBASIC19■□□□□ 0.63
SEH1LQ96EE3 MIR6724-2-201ENST00000616483 92 ntBASIC19■□□□□ 0.63
SEH1LQ96EE3 MIR6724-4-201ENST00000617390 92 ntBASIC19■□□□□ 0.63
SEH1LQ96EE3 MIR6724-3-201ENST00000622482 92 ntBASIC19■□□□□ 0.63
SEH1LQ96EE3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19■□□□□ 0.63
SEH1LQ96EE3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEH1LQ96EE3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SEH1LQ96EE3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEH1LQ96EE3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19■□□□□ 0.63
SEH1LQ96EE3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19■□□□□ 0.63
SEH1LQ96EE3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEH1LQ96EE3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.99■□□□□ 0.63
SEH1LQ96EE3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEH1LQ96EE3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEH1LQ96EE3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEH1LQ96EE3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SEH1LQ96EE3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEH1LQ96EE3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SEH1LQ96EE3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEH1LQ96EE3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEH1LQ96EE3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEH1LQ96EE3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.96■□□□□ 0.63
SEH1LQ96EE3 AC080038.3-201ENST00000623346 1952 ntBASIC18.96■□□□□ 0.63
SEH1LQ96EE3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEH1LQ96EE3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEH1LQ96EE3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms