Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE4Q96A23 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE4Q96A23 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE4Q96A23 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE4Q96A23 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE4Q96A23 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CPNE4Q96A23 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CPNE4Q96A23 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.63■□□□□ 0.73
CPNE4Q96A23 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CPNE4Q96A23 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.63■□□□□ 0.73
CPNE4Q96A23 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.63■□□□□ 0.73
CPNE4Q96A23 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.63■□□□□ 0.73
CPNE4Q96A23 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE4Q96A23 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE4Q96A23 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE4Q96A23 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.63■□□□□ 0.73
CPNE4Q96A23 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CPNE4Q96A23 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE4Q96A23 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE4Q96A23 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE4Q96A23 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE4Q96A23 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE4Q96A23 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.62■□□□□ 0.73
CPNE4Q96A23 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE4Q96A23 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE4Q96A23 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE4Q96A23 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CPNE4Q96A23 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CPNE4Q96A23 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.62■□□□□ 0.73
CPNE4Q96A23 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE4Q96A23 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE4Q96A23 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE4Q96A23 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE4Q96A23 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CPNE4Q96A23 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE4Q96A23 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CPNE4Q96A23 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE4Q96A23 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE4Q96A23 LINC01960-201ENST00000563759 1884 ntBASIC19.6■□□□□ 0.73
CPNE4Q96A23 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE4Q96A23 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.6■□□□□ 0.73
CPNE4Q96A23 TSPY26P-201ENST00000476365 1326 ntBASIC19.6■□□□□ 0.73
CPNE4Q96A23 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE4Q96A23 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE4Q96A23 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE4Q96A23 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE4Q96A23 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE4Q96A23 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE4Q96A23 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE4Q96A23 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CPNE4Q96A23 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE4Q96A23 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE4Q96A23 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE4Q96A23 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CPNE4Q96A23 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CPNE4Q96A23 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE4Q96A23 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE4Q96A23 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE4Q96A23 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE4Q96A23 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.59■□□□□ 0.73
CPNE4Q96A23 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE4Q96A23 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE4Q96A23 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE4Q96A23 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE4Q96A23 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE4Q96A23 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE4Q96A23 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE4Q96A23 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CPNE4Q96A23 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CPNE4Q96A23 AC010141.3-201ENST00000456659 717 ntBASIC19.58■□□□□ 0.72
CPNE4Q96A23 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.58■□□□□ 0.72
CPNE4Q96A23 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE4Q96A23 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CPNE4Q96A23 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE4Q96A23 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.58■□□□□ 0.72
CPNE4Q96A23 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE4Q96A23 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE4Q96A23 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE4Q96A23 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CPNE4Q96A23 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE4Q96A23 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE4Q96A23 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE4Q96A23 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE4Q96A23 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.57■□□□□ 0.72
CPNE4Q96A23 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE4Q96A23 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE4Q96A23 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.57■□□□□ 0.72
CPNE4Q96A23 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.57■□□□□ 0.72
CPNE4Q96A23 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE4Q96A23 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE4Q96A23 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE4Q96A23 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE4Q96A23 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CPNE4Q96A23 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CPNE4Q96A23 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms