Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC068587.7-201ENST00000641602 218 ntBASIC21.05■□□□□ 0.96
UBE2E3Q969T4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
UBE2E3Q969T4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
UBE2E3Q969T4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2E3Q969T4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2E3Q969T4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 SERBP1P1-201ENST00000396021 1160 ntBASIC21.04■□□□□ 0.96
UBE2E3Q969T4 OR2I1P-207ENST00000453522 948 ntBASIC21.04■□□□□ 0.96
UBE2E3Q969T4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 CA15P2-201ENST00000611168 834 ntBASIC21.04■□□□□ 0.96
UBE2E3Q969T4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 AC079834.2-201ENST00000609776 1949 ntBASIC21.04■□□□□ 0.96
UBE2E3Q969T4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2E3Q969T4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2E3Q969T4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.02■□□□□ 0.96
UBE2E3Q969T4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
UBE2E3Q969T4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.02■□□□□ 0.96
UBE2E3Q969T4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
UBE2E3Q969T4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
UBE2E3Q969T4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.02■□□□□ 0.96
UBE2E3Q969T4 AC136469.2-201ENST00000623944 1028 ntBASIC21.02■□□□□ 0.96
UBE2E3Q969T4 AL031602.1-201ENST00000633169 911 ntBASIC21.02■□□□□ 0.96
UBE2E3Q969T4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2E3Q969T4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
UBE2E3Q969T4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2E3Q969T4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBE2E3Q969T4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBE2E3Q969T4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
UBE2E3Q969T4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2E3Q969T4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2E3Q969T4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
UBE2E3Q969T4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
UBE2E3Q969T4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.01■□□□□ 0.95
UBE2E3Q969T4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2E3Q969T4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2E3Q969T4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2E3Q969T4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2E3Q969T4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2E3Q969T4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2E3Q969T4 AC008406.3-201ENST00000620001 1374 ntBASIC21■□□□□ 0.95
UBE2E3Q969T4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2E3Q969T4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2E3Q969T4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2E3Q969T4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21■□□□□ 0.95
UBE2E3Q969T4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21■□□□□ 0.95
UBE2E3Q969T4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2E3Q969T4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21■□□□□ 0.95
UBE2E3Q969T4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2E3Q969T4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2E3Q969T4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 AC087239.1-201ENST00000622671 572 ntBASIC20.99■□□□□ 0.95
UBE2E3Q969T4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2E3Q969T4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 LINC00526-201ENST00000581067 1875 ntBASIC20.98■□□□□ 0.95
UBE2E3Q969T4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2E3Q969T4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms